mRNA-encoded Cas13 can be used to treat dengue infections in mice

Nat Microbiol. 2024 Aug;9(8):2160-2172. doi: 10.1038/s41564-024-01726-6. Epub 2024 Jun 5.

Abstract

Dengue is a major global health threat, and there are no approved antiviral agents. Prior research using Cas13 only demonstrated dengue mitigation in vitro. Here we demonstrate that systemic delivery of mRNA-encoded Cas13a and guide RNAs formulated in lipid nanoparticles can be used to treat dengue virus (DENV) 2 and 3 in mice. First, we identified guides against DENV 2 and 3 that demonstrated in vitro efficacy. Next, we confirmed that Cas13 enzymatic activity is necessary for DENV 2 or DENV 3 mitigation in vitro. Last, we show that a single dose of lipid-nanoparticle-formulated mRNA-encoded Cas13a and guide RNA, administered 1 day post-infection, promotes survival of all infected animals and serum viral titre decreases on days 2 and 3 post-infection after lethal challenge in mice. Off-target analysis in mice using RNA sequencing showed no collateral cleavage. Overall, these data demonstrate the potential of mRNA-encoded Cas13 as a pan-DENV drug.

MeSH terms

  • Animals
  • Antiviral Agents* / administration & dosage
  • Antiviral Agents* / pharmacology
  • CRISPR-Associated Proteins / genetics
  • CRISPR-Associated Proteins / metabolism
  • Dengue Virus* / drug effects
  • Dengue Virus* / genetics
  • Dengue* / drug therapy
  • Disease Models, Animal*
  • Female
  • Humans
  • Lipids / chemistry
  • Liposomes
  • Mice
  • Nanoparticles* / chemistry
  • RNA, Guide, CRISPR-Cas Systems / genetics
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • Viral Load / drug effects

Substances

  • RNA, Messenger
  • Lipid Nanoparticles
  • Antiviral Agents
  • RNA, Guide, CRISPR-Cas Systems
  • CRISPR-Associated Proteins
  • Lipids
  • Liposomes