A mammalian model reveals inorganic polyphosphate channeling into the nucleolus and induction of a hyper-condensate state

Cell Rep Methods. 2024 Jul 15;4(7):100814. doi: 10.1016/j.crmeth.2024.100814. Epub 2024 Jul 8.

Abstract

Inorganic polyphosphate (polyP) is a ubiquitous polymer that controls fundamental processes. To overcome the absence of a genetically tractable mammalian model, we developed an inducible mammalian cell line expressing Escherichia coli polyphosphate kinase 1 (EcPPK1). Inducing EcPPK1 expression prompted polyP synthesis, enabling validation of polyP analytical methods. Virtually all newly synthesized polyP accumulates within the nucleus, mainly in the nucleolus. The channeled polyP within the nucleolus results in the redistribution of its markers, leading to altered rRNA processing. Ultrastructural analysis reveals electron-dense polyP structures associated with a hyper-condensed nucleolus resulting from an exacerbation of the liquid-liquid phase separation (LLPS) phenomena controlling this membraneless organelle. The selective accumulation of polyP in the nucleoli could be interpreted as an amplification of polyP channeling to where its physiological function takes place. Indeed, quantitative analysis of several mammalian cell lines confirms that endogenous polyP accumulates within the nucleolus.

Keywords: CP: Molecular biology; PPK1; inorganic polyphosphates; liquid-liquid phase separation; nucleolus; nucleus; polyphosphorilation; toluidine blue.

MeSH terms

  • Animals
  • Cell Line
  • Cell Nucleolus* / metabolism
  • Escherichia coli / metabolism
  • HeLa Cells
  • Humans
  • Phosphotransferases (Phosphate Group Acceptor) / genetics
  • Phosphotransferases (Phosphate Group Acceptor) / metabolism
  • Polyphosphates* / metabolism
  • RNA, Ribosomal / metabolism

Substances

  • Polyphosphates
  • polyphosphate kinase
  • Phosphotransferases (Phosphate Group Acceptor)
  • RNA, Ribosomal