Heavy water inhibits DNA double-strand break repairs and disturbs cellular transcription, presumably via quantum-level mechanisms of kinetic isotope effects on hydrolytic enzyme reactions

PLoS One. 2024 Oct 3;19(10):e0309689. doi: 10.1371/journal.pone.0309689. eCollection 2024.

Abstract

Heavy water, containing the heavy hydrogen isotope, is toxic to cells, although the underlying mechanism remains incompletely understood. In addition, certain enzymatic proton transfer reactions exhibit kinetic isotope effects attributed to hydrogen isotopes and their temperature dependencies, indicative of quantum tunneling phenomena. However, the correlation between the biological effects of heavy water and the kinetic isotope effects mediated by hydrogen isotopes remains elusive. In this study, we elucidated the kinetic isotope effects arising from hydrogen isotopes of water and their temperature dependencies in vitro, focusing on deacetylation, DNA cleavage, and protein cleavage, which are crucial enzymatic reactions mediated by hydrolysis. Intriguingly, the intracellular isotope effects of heavy water, related to the in vitro kinetic isotope effects, significantly impeded multiple DNA double-strand break repair mechanisms crucial for cell survival. Additionally, heavy water exposure enhanced histone acetylation and associated transcriptional activation in cells, consistent with the in vitro kinetic isotope effects observed in histone deacetylation reactions. Moreover, as observed for the in vitro kinetic isotope effects, the cytotoxic effect on cell proliferation induced by heavy water exhibited temperature-dependency. These findings reveal the substantial impact of heavy water-induced isotope effects on cellular functions governed by hydrolytic enzymatic reactions, potentially mediated by quantum-level mechanisms underlying kinetic isotope effects.

MeSH terms

  • Acetylation
  • Cell Proliferation
  • DNA / metabolism
  • DNA Breaks, Double-Stranded*
  • DNA Repair*
  • Histones / metabolism
  • Humans
  • Hydrolysis
  • Kinetics
  • Temperature
  • Transcription, Genetic
  • Water* / chemistry
  • Water* / metabolism

Substances

  • Water
  • Histones
  • DNA

Grants and funding

This study was funded by the Japan Society for the Promotion of Science (JSPS) KAKENHI grants 20K12177 (to TYas), 20K08071 (to KT and TYas), 22H03743 (to WK and TYas), and 22K08414 (to TG and TYas). This study was also funded by the joint research program of the Biosignal Research Center, Kobe University, grants 281004 (to TYas and KS), and 201003 (to TYas and KS). The funders had no role in the study design, data collection, interpretation, or decision to submit the work for publication.