Development of a concentration method for simple and sensitive detection of SARS-CoV-2 in saliva using a magnetic nanoparticle kit

J Virol Methods. 2025 Jan:331:115059. doi: 10.1016/j.jviromet.2024.115059. Epub 2024 Nov 1.

Abstract

Background: When diagnosing viral infections in humans and animals, the presence of virus in a sample in trace amounts that are below the analytical sensitivity of the detection system may cause false negative results and inaccurate diagnosis. We previously reported the development of a simple virion concentration technique using 12 ml large-volume samples that can dramatically improve diagnostic sensitivity by increasing analytical sensitivity by 100-fold over conventional methods. The present study was conducted to further improve the simplicity and versatility of this method. We constructed a simple and highly sensitive method for the detection of SARS-CoV-2 in human saliva after concentration using a magnetic nanoparticle conjugated with polyethylene glycol (PEG).

Results: Performance of the method was evaluated by comparing a combination of automated nucleic acid extraction and RT-qPCR or triplex RT-LAM detection in a spiked sample of 20 ml saliva collected from healthy humans. The method theoretically achieved 300-fold concentration of spiked SARS-CoV-2 in saliva, enabling 10- to 1000-fold higher analytical sensitivity for detection compared to conventional RNA extraction methods.

Conclusions: This newly developed method allows for easy and reliable concentration of the virion in less than 60 min, improving the analytical sensitivity of the SARS-CoV-2 test. Further, the method allows for easy and reliable enrichment of the virus in less than 60 min, improving the analytical sensitivity of the SARS-CoV-2 test. This method is easily used for highly sensitive virus detection from a variety of human oral fluid samples and may also be applied to rapid and labor-saving screening tests by pooling a large number of samples.

Keywords: COVID-19; Concentration; Magnetic nanoparticle; Pegcision; SARS-CoV-2; virion; virus.

MeSH terms

  • COVID-19 Nucleic Acid Testing / methods
  • COVID-19* / diagnosis
  • COVID-19* / virology
  • Humans
  • Magnetite Nanoparticles* / chemistry
  • RNA, Viral* / analysis
  • RNA, Viral* / genetics
  • RNA, Viral* / isolation & purification
  • SARS-CoV-2* / genetics
  • SARS-CoV-2* / isolation & purification
  • Saliva* / virology
  • Sensitivity and Specificity*

Substances

  • Magnetite Nanoparticles
  • RNA, Viral