Nap1 and Kap114 co-chaperone H2A-H2B and facilitate targeted histone release in the nucleus

J Cell Biol. 2025 Jan 6;224(1):e202408193. doi: 10.1083/jcb.202408193. Epub 2024 Nov 27.

Abstract

Core histones, synthesized and processed in the cytoplasm, must be chaperoned as they are transported into the nucleus for nucleosome assembly. The importin Kap114 transports H2A-H2B into the yeast nucleus, where RanGTP facilitates histone release. Kap114 and H2A-H2B also bind the histone chaperone Nap1, but how Nap1 and Kap114 cooperate in transport and nucleosome assembly remains unclear. Here, biochemical and structural analyses show that Kap114, H2A-H2B, and a Nap1 dimer (Nap12) associate in the absence and presence of RanGTP to form equimolar complexes. A previous study had shown that RanGTP reduces Kap114's ability to chaperone H2A-H2B, but a new cryo-EM structure of the Nap12•H2A-H2B•Kap114•RanGTP complex explains how both Kap114 and Nap12 interact with H2A-H2B, restoring its chaperoning within the assembly while effectively depositing it into nucleosomes. Together, our results suggest that Kap114 and Nap12 provide a sheltered path that facilitates the transfer of H2A-H2B from Kap114 to Nap12, ultimately directing its specific deposition into nucleosomes.

MeSH terms

  • Cell Nucleus* / metabolism
  • Cryoelectron Microscopy
  • Histones* / genetics
  • Histones* / metabolism
  • Molecular Chaperones / genetics
  • Molecular Chaperones / metabolism
  • Nucleosome Assembly Protein 1* / genetics
  • Nucleosome Assembly Protein 1* / metabolism
  • Nucleosomes* / genetics
  • Nucleosomes* / metabolism
  • Nucleosomes* / ultrastructure
  • Protein Binding
  • Saccharomyces cerevisiae Proteins* / genetics
  • Saccharomyces cerevisiae Proteins* / metabolism
  • Saccharomyces cerevisiae* / genetics
  • Saccharomyces cerevisiae* / metabolism
  • beta Karyopherins / genetics
  • beta Karyopherins / metabolism
  • ran GTP-Binding Protein / genetics
  • ran GTP-Binding Protein / metabolism

Substances

  • Histones
  • Saccharomyces cerevisiae Proteins
  • Nucleosome Assembly Protein 1
  • Nucleosomes
  • NAP1 protein, S cerevisiae
  • ran GTP-Binding Protein
  • Molecular Chaperones
  • beta Karyopherins