Non-coding RNA Networks in Infection

Methods Mol Biol. 2025:2883:53-77. doi: 10.1007/978-1-0716-4290-0_3.

Abstract

In the face of global health challenges posed by infectious diseases and the emergence of drug-resistant pathogens, the exploration of cellular non-coding RNA (ncRNA) networks has unveiled new dimensions in infection research. Particularly microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) have emerged as instrumental players in ensuring a balance between protection against hyper-inflammatory conditions and the effective elimination of pathogens. Specifically, ncRNAs, such as the miRNA miR-155 or the lncRNAs MaIL1 (macrophage interferon-regulatory lncRNA 1), and LUCAT1 (lung cancer-associated transcript 1) have been recurrently linked to infectious and inflammatory diseases. Together with other ncRNAs, discussed in this chapter, they form a complex regulatory network shaping the host response to pathogens. Additionally, some pathogens exploit these ncRNAs to establish and sustain infections, underscoring their dual roles in host protection and colonization. Despite the substantial progress made, the vast majority of ncRNA loci remains unexplored, with ongoing research likely to reveal novel ncRNA categories and expand our understanding of their roles in infections. This chapter consolidates current insights into ncRNA-mediated regulatory networks, highlighting their contributions to severe diseases and their potential as targets and biomarkers for innovative therapeutic strategies.

Keywords: Bacteria; Immune-response; Immunity; Infection; Inflammation; Manipulation; Pathogens; Viruses; lncRNA; miRNA; Non-coding RNA.

MeSH terms

  • Animals
  • Biomarkers
  • Gene Expression Regulation
  • Gene Regulatory Networks*
  • Host-Pathogen Interactions / genetics
  • Humans
  • Infections* / genetics
  • MicroRNAs* / genetics
  • MicroRNAs* / metabolism
  • RNA, Long Noncoding* / genetics
  • RNA, Long Noncoding* / metabolism

Substances

  • Biomarkers
  • MicroRNAs
  • RNA, Long Noncoding