Negative staining electron microscopy is one of the easiest ways to determine the shape and dimensions of multimeric protein complexes over 100 kDa molecular weight. This method requires small volumes (< 10 μL) of dilute protein (0.01-0.1 mg/mL). Here we describe a method for quickly crosslinking a protein sample and preparing negative stained grids, and we also describe how to label a biotinylated protein subunit with avidin to determine its position within a complex using negative staining EM. This method should be generally applicable for most soluble protein complexes.
Keywords: Avidin; Crosslinking; Electron microscopy; Negative staining; Protein complex; Sec1/Munc18; Structure determination.
© 2025. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.