Location, structure, and function of the target of a transcriptional activator protein

Genes Dev. 1994 Dec 15;8(24):3058-67. doi: 10.1101/gad.8.24.3058.

Abstract

We have isolated and characterized single-amino-acid substitution mutants of RNA polymerase alpha subunit defective in CAP-dependent transcription at the lac promoter but not defective in CAP-independent transcription. Our results establish that (1) amino acids 258-265 of alpha constitute an "activation target" essential for CAP-dependent transcription at the lac promoter but not essential for CAP-independent transcription, (2) amino acid 261 is the most critical amino acid of the activation target, (3) amino acid 261 is distinct from the determinants for alpha-DNA interaction, and (4) the activation target may fold as a surface amphipathic alpha-helix. We propose a model for transcriptional activation at the lac promoter that integrates these and other recent results regarding transcriptional activation and RNA polymerase structure and function.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cyclic AMP Receptor Protein / metabolism*
  • DNA Primers
  • DNA, Bacterial / metabolism*
  • DNA-Directed RNA Polymerases / biosynthesis
  • DNA-Directed RNA Polymerases / metabolism*
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism*
  • Gene Expression Regulation, Bacterial*
  • Macromolecular Substances
  • Molecular Sequence Data
  • Mutagenesis
  • Oligodeoxyribonucleotides
  • Plasmids
  • Point Mutation*
  • Promoter Regions, Genetic
  • Transcription, Genetic*

Substances

  • Cyclic AMP Receptor Protein
  • DNA Primers
  • DNA, Bacterial
  • Macromolecular Substances
  • Oligodeoxyribonucleotides
  • DNA-Directed RNA Polymerases