Alternative splicing of RNA transcripts encoded by the murine p105 NF-kappa B gene generates I kappa B gamma isoforms with different inhibitory activities

Proc Natl Acad Sci U S A. 1994 May 10;91(10):4367-71. doi: 10.1073/pnas.91.10.4367.

Abstract

The gene encoding the 105-kDa protein (p105) precursor of the p50 subunit of transcription factor NF-kappa B also encodes a p70 I kappa B protein, I kappa B gamma, which is identical to the C-terminal 607 amino acids of p105. Here we show that alternative RNA splicing generates I kappa B gamma isoforms with properties different from those of p70. One 63-kDa isoform, termed I kappa B gamma-1, which lacks 59 amino acids C-terminal to ankyrin repeat 7, has a novel 35-amino acid C terminus encoded by an alternative reading frame of the p105 gene. A 55-kDa isoform, I kappa B gamma-2, lacks the 190 C-terminal amino acids of p70I kappa B gamma. In contrast to p70I kappa B gamma, which is a cytoplasmic protein, I kappa B gamma-1 is found in both the cytoplasm and nucleus, whereas I kappa B gamma-2 is predominantly nuclear. The I kappa B gamma isoforms also display differences in specificity and affinity for Rel/NF-kappa B proteins. While p70I kappa B gamma inhibits p50-, p65-, and c-Rel-mediated transactivation and/or DNA binding, both I kappa B gamma-1 and I kappa B gamma-2 are specific for p50 and have different affinities for this subunit. The absence in I kappa B gamma-1 and I kappa B gamma-2 of a protein kinase A site whose phosphorylation modulates p70I kappa B gamma inhibitory activity suggests that alternative RNA splicing may be used to generate I kappa B gamma isoforms that respond differently to intracellular signals.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alternative Splicing*
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cell Line
  • DNA / metabolism
  • DNA Primers
  • Gene Expression
  • Humans
  • Mice
  • Molecular Sequence Data
  • NF-kappa B / biosynthesis
  • NF-kappa B / genetics*
  • NF-kappa B p50 Subunit
  • Polymerase Chain Reaction
  • RNA, Messenger / biosynthesis
  • RNA, Messenger / metabolism*
  • T-Lymphocytes
  • Transcription Factors / biosynthesis*
  • Transcription Factors / metabolism
  • Transcription, Genetic*
  • Transfection

Substances

  • DNA Primers
  • NF-kappa B
  • NF-kappa B p50 Subunit
  • NFKB1 protein, human
  • RNA, Messenger
  • Transcription Factors
  • Nfkb1 protein, mouse
  • DNA

Associated data

  • GENBANK/L28117
  • GENBANK/L28118