During embryogenesis of Caenorhabditis elegans cellular interactions are necessary to determine the fate of blastomeres. In one of these interactions, taking place in the 4-cell stage, the germline cell P2 induces longitudinal orientation of the cleavage spindle in the neighboring EMS cell, its asymmetric division, and the establishment of a gut lineage. Application of several polysulfated hydrocarbon dyes (e.g., trypan blue, TB) in the 1- to 4-cell stages inhibits induction of the gut precursor cell. However, dye application from the late 4-cell stage onward does not interfere with gut induction, supporting the earlier finding of a short time window for this interaction. We also tested the effect of TB on the induction of pharyngeal muscle cells by the MS blastomere, which appears to involve a surface receptor-ligand interaction. We found that this process is inhibited as well. These and additional data indicate that polysulfated hydrocarbon dyes are suitable tools to generally interfere with cell-cell interactions in the nematode embryo.