Long distance polymerase chain reaction for detection of chromosome translocations in B-cell lymphoma/leukemia

Leukemia. 1997 Apr:11 Suppl 3:316-7.

Abstract

To establish a rapid and sensitive method to detect neoplastic cells carrying a specific chromosomal translocation in B-cell lymphoma/leukemia, we have developed a novel strategy based on long distance polymerase chain reaction (LD-PCR) amplification. Genomic DNA were extracted from tumor cells carrying a t(14;19)(q32;q13), a t(8;14)(q24;q32), a t(3;22)(q27;q11), a t(2;3)(p12;q27), and a t(3;14)(q27;q32). Oligonucleotide primer pairs were designed to be complementary to exons or flanking sequences of the BCL3, c-MYC and BCL6 oncogenes, and to constant region genes of the IG genes. LD-PCR with a newly available Taq polymerase for longer product synthesis successfully amplified fragments representing BCL3/C alpha junctional sequences for t(14;19); c-MYC/C mu, c-MYC/C gamma and c-MYC/C alpha for t(8;14); BCL6/C lambda for t(3;22); BCL6/C kappa for t(2;3); 5'-BCL6/C mu and 5'-BCL6/C gamma for t(3;14), respectively. The sizes of the amplified fragments were varied from 1.8 kb to 12 kb, which were specific to each material. Present study provides a useful tool for diagnosis and subsequent management of B-cell lymphoma/leukemia characterized with specific chromosomal translocation.

MeSH terms

  • B-Cell Lymphoma 3 Protein
  • Burkitt Lymphoma / genetics*
  • Chromosome Mapping*
  • Chromosomes, Human
  • Chromosomes, Human, Pair 14*
  • Chromosomes, Human, Pair 8*
  • DNA Primers
  • DNA, Neoplasm / analysis
  • DNA-Binding Proteins / genetics
  • Exons
  • Genes, myc
  • Humans
  • Leukemia, B-Cell / genetics*
  • Lymphoma, B-Cell / genetics*
  • Polymerase Chain Reaction / methods*
  • Proto-Oncogene Proteins / genetics
  • Proto-Oncogene Proteins c-bcl-6
  • Proto-Oncogenes
  • Transcription Factors / genetics
  • Translocation, Genetic*

Substances

  • B-Cell Lymphoma 3 Protein
  • BCL3 protein, human
  • DNA Primers
  • DNA, Neoplasm
  • DNA-Binding Proteins
  • Proto-Oncogene Proteins
  • Proto-Oncogene Proteins c-bcl-6
  • Transcription Factors