Sequencing and expression of the gene encoding a cold-active citrate synthase from an Antarctic bacterium, strain DS2-3R

Eur J Biochem. 1997 Aug 15;248(1):49-57. doi: 10.1111/j.1432-1033.1997.00049.x.

Abstract

The gene encoding citrate synthase from a novel bacterial isolate (DS2-3R) from Antarctica has been cloned, sequenced and over expressed in Escherichia coli. Both the recombinant enzyme and the native enzyme, purified from DS2-3R, are cold-active, with a temperature optimum of 31 degrees C. In addition the enzymes are rapidly inactivated at 45 degrees C, and show significant activity at 10 degrees C and below. Comparison of amino acid sequences indicates that DS2-3R citrate synthase is most closely related to the enzyme from gram-positive bacteria. The amino acid sequence of the DS2-3R enzyme shows several features previously recognised in other cold-active enzymes, including an extended surface loop, an increase in the occurrence of charged residues and a decrease in the number of proline residues in loops. Other changes observed in some psychrophilic enzymes, such as a decrease in isoleucine content and in arginine/(arginine+lysine) content, were not seen in this case.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antarctic Regions
  • Bacteria / enzymology*
  • Bacteria / genetics*
  • Bacteria / isolation & purification
  • Base Sequence
  • Citrate (si)-Synthase / antagonists & inhibitors
  • Citrate (si)-Synthase / genetics*
  • Citrate (si)-Synthase / metabolism*
  • Cloning, Molecular
  • Cold Temperature
  • DNA Primers / genetics
  • DNA, Bacterial / genetics
  • Escherichia coli / genetics
  • Gene Expression
  • Genes, Bacterial*
  • Gram-Positive Bacteria / enzymology
  • Gram-Positive Bacteria / genetics
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Protein Structure, Secondary
  • Recombinant Proteins / antagonists & inhibitors
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Homology, Amino Acid

Substances

  • DNA Primers
  • DNA, Bacterial
  • Recombinant Proteins
  • Citrate (si)-Synthase

Associated data

  • GENBANK/U85944