Liu JS - Search Results

1

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes.

McCue L, Thompson W, Carmack C, Ryan MP, Liu JS, Derbyshire V, Lawrence CE. McCue L, et al. Among authors: liu js. Nucleic Acids Res. 2001 Feb 1;29(3):774-82. doi: 10.1093/nar/29.3.774. Nucleic Acids Res. 2001. PMID: 11160901 Free PMC article.

2

BALSA: Bayesian algorithm for local sequence alignment.

Webb BJ, Liu JS, Lawrence CE. Webb BJ, et al. Among authors: liu js. Nucleic Acids Res. 2002 Mar 1;30(5):1268-77. doi: 10.1093/nar/30.5.1268. Nucleic Acids Res. 2002. PMID: 11861921 Free PMC article.

3

Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.

Qin ZS, McCue LA, Thompson W, Mayerhofer L, Lawrence CE, Liu JS. Qin ZS, et al. Among authors: liu js. Nat Biotechnol. 2003 Apr;21(4):435-9. doi: 10.1038/nbt802. Epub 2003 Mar 10. Nat Biotechnol. 2003. PMID: 12627170

4

Decoding human regulatory circuits.

Thompson W, Palumbo MJ, Wasserman WW, Liu JS, Lawrence CE. Thompson W, et al. Among authors: liu js. Genome Res. 2004 Oct;14(10A):1967-74. doi: 10.1101/gr.2589004. Genome Res. 2004. PMID: 15466295 Free PMC article.

5

Extracting protein alignment models from the sequence database.

Neuwald AF, Liu JS, Lipman DJ, Lawrence CE. Neuwald AF, et al. Among authors: liu js. Nucleic Acids Res. 1997 May 1;25(9):1665-77. doi: 10.1093/nar/25.9.1665. Nucleic Acids Res. 1997. PMID: 9108146 Free PMC article.

6

Bayesian adaptive sequence alignment algorithms.

Zhu J, Liu JS, Lawrence CE. Zhu J, et al. Among authors: liu js. Bioinformatics. 1998;14(1):25-39. doi: 10.1093/bioinformatics/14.1.25. Bioinformatics. 1998. PMID: 9520499

7

A Bayesian method for classification of images from electron micrographs.

Samsó M, Palumbo MJ, Radermacher M, Liu JS, Lawrence CE. Samsó M, et al. Among authors: liu js. J Struct Biol. 2002 Jun;138(3):157-70. doi: 10.1016/s1047-8477(02)00001-1. J Struct Biol. 2002. PMID: 12217655

8

Gibbs motif sampling: detection of bacterial outer membrane protein repeats.

Neuwald AF, Liu JS, Lawrence CE. Neuwald AF, et al. Among authors: liu js. Protein Sci. 1995 Aug;4(8):1618-32. doi: 10.1002/pro.5560040820. Protein Sci. 1995. PMID: 8520488 Free PMC article.

9

Bayesian inference on biopolymer models.

Liu JS, Lawrence CE. Liu JS, et al. Bioinformatics. 1999 Jan;15(1):38-52. doi: 10.1093/bioinformatics/15.1.38. Bioinformatics. 1999. PMID: 10068691

10

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment.

Lawrence CE, Altschul SF, Boguski MS, Liu JS, Neuwald AF, Wootton JC. Lawrence CE, et al. Among authors: liu js. Science. 1993 Oct 8;262(5131):208-14. doi: 10.1126/science.8211139. Science. 1993. PMID: 8211139

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