Park J - Search Results

1

Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast.

Park J, Lappe M, Teichmann SA. Park J, et al. J Mol Biol. 2001 Mar 30;307(3):929-38. doi: 10.1006/jmbi.2001.4526. J Mol Biol. 2001. PMID: 11273711

2

Intermediate sequences increase the detection of homology between sequences.

Park J, Teichmann SA, Hubbard T, Chothia C. Park J, et al. J Mol Biol. 1997 Oct 17;273(1):349-54. doi: 10.1006/jmbi.1997.1288. J Mol Biol. 1997. PMID: 9367767

3

DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins.

Park J, Teichmann SA. Park J, et al. Bioinformatics. 1998;14(2):144-50. doi: 10.1093/bioinformatics/14.2.144. Bioinformatics. 1998. PMID: 9545446

4

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods.

Park J, Karplus K, Barrett C, Hughey R, Haussler D, Hubbard T, Chothia C. Park J, et al. J Mol Biol. 1998 Dec 11;284(4):1201-10. doi: 10.1006/jmbi.1998.2221. J Mol Biol. 1998. PMID: 9837738

5

Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements.

Teichmann SA, Park J, Chothia C. Teichmann SA, et al. Among authors: park j. Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14658-63. doi: 10.1073/pnas.95.25.14658. Proc Natl Acad Sci U S A. 1998. PMID: 9843945 Free PMC article.

6

Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL.

Teichmann SA, Chothia C, Church GM, Park J. Teichmann SA, et al. Among authors: park j. Bioinformatics. 2000 Feb;16(2):117-24. doi: 10.1093/bioinformatics/16.2.117. Bioinformatics. 2000. PMID: 10842732

7

A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3.

Dietmann S, Park J, Notredame C, Heger A, Lappe M, Holm L. Dietmann S, et al. Among authors: park j. Nucleic Acids Res. 2001 Jan 1;29(1):55-7. doi: 10.1093/nar/29.1.55. Nucleic Acids Res. 2001. PMID: 11125048 Free PMC article.

8

PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.

Qian J, Stenger B, Wilson CA, Lin J, Jansen R, Teichmann SA, Park J, Krebs WG, Yu H, Alexandrov V, Echols N, Gerstein M. Qian J, et al. Among authors: park j. Nucleic Acids Res. 2001 Apr 15;29(8):1750-64. doi: 10.1093/nar/29.8.1750. Nucleic Acids Res. 2001. PMID: 11292848 Free PMC article.

9

Generating protein interaction maps from incomplete data: application to fold assignment.

Lappe M, Park J, Niggemann O, Holm L. Lappe M, et al. Among authors: park j. Bioinformatics. 2001;17 Suppl 1:S149-56. doi: 10.1093/bioinformatics/17.suppl_1.s149. Bioinformatics. 2001. PMID: 11473004

10

Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation.

Pramanik J, Chen X, Kar G, Henriksson J, Gomes T, Park JE, Natarajan K, Meyer KB, Miao Z, McKenzie ANJ, Mahata B, Teichmann SA. Pramanik J, et al. Among authors: park je. Genome Med. 2018 Oct 24;10(1):76. doi: 10.1186/s13073-018-0589-3. Genome Med. 2018. PMID: 30355343 Free PMC article.

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