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Page 1
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA; Mammalian Gene Collection Program Team. Strausberg RL, et al. Among authors: krzywinski mi. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. doi: 10.1073/pnas.242603899. Epub 2002 Dec 11. Proc Natl Acad Sci U S A. 2002. PMID: 12477932 Free PMC article.
Convolutional neural networks.
Derry A, Krzywinski M, Altman N. Derry A, et al. Nat Methods. 2023 Sep;20(9):1269-1270. doi: 10.1038/s41592-023-01973-1. Nat Methods. 2023. PMID: 37580560 No abstract available.
Regression modeling of time-to-event data with censoring.
Dey T, Lipsitz SR, Cooper Z, Trinh QD, Krzywinski M, Altman N. Dey T, et al. Nat Methods. 2022 Dec;19(12):1513-1515. doi: 10.1038/s41592-022-01689-8. Nat Methods. 2022. PMID: 36385649 No abstract available.
Neural networks primer.
Derry A, Krzywinski M, Altman N. Derry A, et al. Nat Methods. 2023 Feb;20(2):165-167. doi: 10.1038/s41592-022-01747-1. Nat Methods. 2023. PMID: 36627451 No abstract available.
Assembly of fingerprint contigs: parallelized FPC.
Ness SR, Terpstra W, Krzywinski M, Marra MA, Jones SJ. Ness SR, et al. Bioinformatics. 2002 Mar;18(3):484-5. doi: 10.1093/bioinformatics/18.3.484. Bioinformatics. 2002. PMID: 11934749
An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones.
Butterfield YS, Marra MA, Asano JK, Chan SY, Guin R, Krzywinski MI, Lee SS, MacDonald KW, Mathewson CA, Olson TE, Pandoh PK, Prabhu AL, Schnerch A, Skalska U, Smailus DE, Stott JM, Tsai MI, Yang GS, Zuyderduyn SD, Schein JE, Jones SJ. Butterfield YS, et al. Among authors: krzywinski mi. Nucleic Acids Res. 2002 Jun 1;30(11):2460-8. doi: 10.1093/nar/30.11.2460. Nucleic Acids Res. 2002. PMID: 12034834 Free PMC article.
Software for automated analysis of DNA fingerprinting gels.
Fuhrmann DR, Krzywinski MI, Chiu R, Saeedi P, Schein JE, Bosdet IE, Chinwalla A, Hillier LW, Waterston RH, McPherson JD, Jones SJ, Marra MA. Fuhrmann DR, et al. Among authors: krzywinski mi. Genome Res. 2003 May;13(5):940-53. doi: 10.1101/gr.904303. Genome Res. 2003. PMID: 12727910 Free PMC article.
Automated ordering of fingerprinted clones.
Flibotte S, Chiu R, Fjell C, Krzywinski M, Schein JE, Shin H, Marra MA. Flibotte S, et al. Bioinformatics. 2004 May 22;20(8):1264-71. doi: 10.1093/bioinformatics/bth079. Epub 2004 Feb 10. Bioinformatics. 2004. PMID: 14871860
108 results