Pleasance ED - Search Results

1

A SAGE approach to discovery of genes involved in autophagic cell death.

Gorski SM, Chittaranjan S, Pleasance ED, Freeman JD, Anderson CL, Varhol RJ, Coughlin SM, Zuyderduyn SD, Jones SJ, Marra MA. Gorski SM, et al. Among authors: pleasance ed. Curr Biol. 2003 Feb 18;13(4):358-63. doi: 10.1016/s0960-9822(03)00082-4. Curr Biol. 2003. PMID: 12593804 Free article.

2

Assessment of SAGE in transcript identification.

Pleasance ED, Marra MA, Jones SJ. Pleasance ED, et al. Genome Res. 2003 Jun;13(6A):1203-15. doi: 10.1101/gr.873003. Epub 2003 May 12. Genome Res. 2003. PMID: 12743019 Free PMC article.

3

Assessment and integration of publicly available SAGE, cDNA microarray, and oligonucleotide microarray expression data for global coexpression analyses.

Griffith OL, Pleasance ED, Fulton DL, Oveisi M, Ester M, Siddiqui AS, Jones SJ. Griffith OL, et al. Among authors: pleasance ed. Genomics. 2005 Oct;86(4):476-88. doi: 10.1016/j.ygeno.2005.06.009. Genomics. 2005. PMID: 16098712

4

cisRED: a database system for genome-scale computational discovery of regulatory elements.

Robertson G, Bilenky M, Lin K, He A, Yuen W, Dagpinar M, Varhol R, Teague K, Griffith OL, Zhang X, Pan Y, Hassel M, Sleumer MC, Pan W, Pleasance ED, Chuang M, Hao H, Li YY, Robertson N, Fjell C, Li B, Montgomery SB, Astakhova T, Zhou J, Sander J, Siddiqui AS, Jones SJ. Robertson G, et al. Among authors: pleasance ed. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D68-73. doi: 10.1093/nar/gkj075. Nucleic Acids Res. 2006. PMID: 16381958 Free PMC article.

5

ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation.

Montgomery SB, Griffith OL, Sleumer MC, Bergman CM, Bilenky M, Pleasance ED, Prychyna Y, Zhang X, Jones SJ. Montgomery SB, et al. Among authors: pleasance ed. Bioinformatics. 2006 Mar 1;22(5):637-40. doi: 10.1093/bioinformatics/btk027. Epub 2006 Jan 5. Bioinformatics. 2006. PMID: 16397004

6

Serial analysis of gene expression in the southern cattle tick following acaricide treatment of larvae from organophosphate resistant and susceptible strains.

Guerrero FD, Bendele KG, Chen AC, Li AY, Miller RJ, Pleasance E, Varhol R, Rousseau ME, Nene VM. Guerrero FD, et al. Insect Mol Biol. 2007 Feb;16(1):49-60. doi: 10.1111/j.1365-2583.2007.00699.x. Insect Mol Biol. 2007. PMID: 17257208

7

Identification and analysis of internal promoters in Caenorhabditis elegans operons.

Huang P, Pleasance ED, Maydan JS, Hunt-Newbury R, O'Neil NJ, Mah A, Baillie DL, Marra MA, Moerman DG, Jones SJ. Huang P, et al. Among authors: pleasance ed. Genome Res. 2007 Oct;17(10):1478-85. doi: 10.1101/gr.6824707. Epub 2007 Aug 21. Genome Res. 2007. PMID: 17712020 Free PMC article.

8

Comprehensive molecular characterization of human colon and rectal cancer.

Cancer Genome Atlas Network. Cancer Genome Atlas Network. Nature. 2012 Jul 18;487(7407):330-7. doi: 10.1038/nature11252. Nature. 2012. PMID: 22810696 Free PMC article.

9

Comprehensive genomic characterization of squamous cell lung cancers.

Cancer Genome Atlas Research Network. Cancer Genome Atlas Research Network. Nature. 2012 Sep 27;489(7417):519-25. doi: 10.1038/nature11404. Epub 2012 Sep 9. Nature. 2012. PMID: 22960745 Free PMC article.

10

Comprehensive molecular portraits of human breast tumours.

Cancer Genome Atlas Network. Cancer Genome Atlas Network. Nature. 2012 Oct 4;490(7418):61-70. doi: 10.1038/nature11412. Epub 2012 Sep 23. Nature. 2012. PMID: 23000897 Free PMC article.

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