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Tools for comparative protein structure modeling and analysis.
Eswar N, John B, Mirkovic N, Fiser A, Ilyin VA, Pieper U, Stuart AC, Marti-Renom MA, Madhusudhan MS, Yerkovich B, Sali A. Eswar N, et al. Among authors: madhusudhan ms. Nucleic Acids Res. 2003 Jul 1;31(13):3375-80. doi: 10.1093/nar/gkg543. Nucleic Acids Res. 2003. PMID: 12824331 Free PMC article.
Protein structure modeling for structural genomics.
Sánchez R, Pieper U, Melo F, Eswar N, Martí-Renom MA, Madhusudhan MS, Mirković N, Sali A. Sánchez R, et al. Among authors: madhusudhan ms. Nat Struct Biol. 2000 Nov;7 Suppl:986-90. doi: 10.1038/80776. Nat Struct Biol. 2000. PMID: 11104007 Review.
RasGRP4, a new mast cell-restricted Ras guanine nucleotide-releasing protein with calcium- and diacylglycerol-binding motifs. Identification of defective variants of this signaling protein in asthma, mastocytosis, and mast cell leukemia patients and demonstration of the importance of RasGRP4 in mast cell development and function.
Yang Y, Li L, Wong GW, Krilis SA, Madhusudhan MS, Sali A, Stevens RL. Yang Y, et al. Among authors: madhusudhan ms. J Biol Chem. 2002 Jul 12;277(28):25756-74. doi: 10.1074/jbc.M202575200. Epub 2002 Apr 15. J Biol Chem. 2002. PMID: 11956218 Free article.
EVA: Evaluation of protein structure prediction servers.
Koh IY, Eyrich VA, Marti-Renom MA, Przybylski D, Madhusudhan MS, Eswar N, Graña O, Pazos F, Valencia A, Sali A, Rost B. Koh IY, et al. Among authors: madhusudhan ms. Nucleic Acids Res. 2003 Jul 1;31(13):3311-5. doi: 10.1093/nar/gkg619. Nucleic Acids Res. 2003. PMID: 12824315 Free PMC article.
MODBASE, a database of annotated comparative protein structure models, and associated resources.
Pieper U, Eswar N, Braberg H, Madhusudhan MS, Davis FP, Stuart AC, Mirkovic N, Rossi A, Marti-Renom MA, Fiser A, Webb B, Greenblatt D, Huang CC, Ferrin TE, Sali A. Pieper U, et al. Among authors: madhusudhan ms. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D217-22. doi: 10.1093/nar/gkh095. Nucleic Acids Res. 2004. PMID: 14681398 Free PMC article.
Alignment of protein sequences by their profiles.
Marti-Renom MA, Madhusudhan MS, Sali A. Marti-Renom MA, et al. Among authors: madhusudhan ms. Protein Sci. 2004 Apr;13(4):1071-87. doi: 10.1110/ps.03379804. Protein Sci. 2004. PMID: 15044736 Free PMC article.
71 results