Makarova KS - Search Results

1

A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes.

Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Rogozin IB, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA. Koonin EV, et al. Among authors: makarova ks. Genome Biol. 2004;5(2):R7. doi: 10.1186/gb-2004-5-2-r7. Epub 2004 Jan 15. Genome Biol. 2004. PMID: 14759257 Free PMC article.

2

Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell.

Makarova KS, Aravind L, Galperin MY, Grishin NV, Tatusov RL, Wolf YI, Koonin EV. Makarova KS, et al. Genome Res. 1999 Jul;9(7):608-28. Genome Res. 1999. PMID: 10413400 Free article.

3

A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases.

Makarova KS, Aravind L, Koonin EV. Makarova KS, et al. Protein Sci. 1999 Aug;8(8):1714-9. doi: 10.1110/ps.8.8.1714. Protein Sci. 1999. PMID: 10452618 Free PMC article.

4

A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae.

Makarova KS, Aravind L, Koonin EV. Makarova KS, et al. Trends Biochem Sci. 2000 Feb;25(2):50-2. doi: 10.1016/s0968-0004(99)01530-3. Trends Biochem Sci. 2000. PMID: 10664582 No abstract available.

5

Short repeats and IS elements in the extremely radiation-resistant bacterium Deinococcus radiodurans and comparison to other bacterial species.

Makarova KS, Wolf YI, White O, Minton K, Daly MJ. Makarova KS, et al. Res Microbiol. 1999 Nov-Dec;150(9-10):711-24. doi: 10.1016/s0923-2508(99)00121-7. Res Microbiol. 1999. PMID: 10673009 Free article.

6

SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories.

Aravind L, Makarova KS, Koonin EV. Aravind L, et al. Among authors: makarova ks. Nucleic Acids Res. 2000 Sep 15;28(18):3417-32. doi: 10.1093/nar/28.18.3417. Nucleic Acids Res. 2000. PMID: 10982859 Free PMC article.

7

Specific expansion of protein families in the radioresistant bacterium Deinococcus radiodurans.

Makarova KS, Aravind L, Daly MJ, Koonin EV. Makarova KS, et al. Genetica. 2000;108(1):25-34. doi: 10.1023/a:1004035424657. Genetica. 2000. PMID: 11145417

8

Gene conversions in genes encoding outer-membrane proteins in H. pylori and C. pneumoniae.

Jordan IK, Makarova KS, Wolf YI, Koonin EV. Jordan IK, et al. Among authors: makarova ks. Trends Genet. 2001 Jan;17(1):7-10. doi: 10.1016/s0168-9525(00)02151-x. Trends Genet. 2001. PMID: 11163905

9

Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics.

Makarova KS, Aravind L, Wolf YI, Tatusov RL, Minton KW, Koonin EV, Daly MJ. Makarova KS, et al. Microbiol Mol Biol Rev. 2001 Mar;65(1):44-79. doi: 10.1128/MMBR.65.1.44-79.2001. Microbiol Mol Biol Rev. 2001. PMID: 11238985 Free PMC article. Review.

10

Lineage-specific gene expansions in bacterial and archaeal genomes.

Jordan IK, Makarova KS, Spouge JL, Wolf YI, Koonin EV. Jordan IK, et al. Among authors: makarova ks. Genome Res. 2001 Apr;11(4):555-65. doi: 10.1101/gr.gr-1660r. Genome Res. 2001. PMID: 11282971 Free PMC article.

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