Lawrence CE - Search Results

1

Sfold web server for statistical folding and rational design of nucleic acids.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W135-41. doi: 10.1093/nar/gkh449. Nucleic Acids Res. 2004. PMID: 15215366 Free PMC article.

2

A statistical sampling algorithm for RNA secondary structure prediction.

Ding Y, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. Nucleic Acids Res. 2003 Dec 15;31(24):7280-301. doi: 10.1093/nar/gkg938. Nucleic Acids Res. 2003. PMID: 14654704 Free PMC article.

3

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. RNA. 2005 Aug;11(8):1157-66. doi: 10.1261/rna.2500605. RNA. 2005. PMID: 16043502 Free PMC article.

4

Structure clustering features on the Sfold Web server.

Chan CY, Lawrence CE, Ding Y. Chan CY, et al. Among authors: lawrence ce. Bioinformatics. 2005 Oct 15;21(20):3926-8. doi: 10.1093/bioinformatics/bti632. Epub 2005 Aug 18. Bioinformatics. 2005. PMID: 16109749

5

Clustering of RNA secondary structures with application to messenger RNAs.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. J Mol Biol. 2006 Jun 9;359(3):554-71. doi: 10.1016/j.jmb.2006.01.056. Epub 2006 Feb 2. J Mol Biol. 2006. PMID: 16631786

6

Effect of target secondary structure on RNAi efficiency.

Shao Y, Chan CY, Maliyekkel A, Lawrence CE, Roninson IB, Ding Y. Shao Y, et al. Among authors: lawrence ce. RNA. 2007 Oct;13(10):1631-40. doi: 10.1261/rna.546207. Epub 2007 Aug 7. RNA. 2007. PMID: 17684233 Free PMC article.

7

Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond.

Ding Y, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. Nucleic Acids Res. 2001 Mar 1;29(5):1034-46. doi: 10.1093/nar/29.5.1034. Nucleic Acids Res. 2001. PMID: 11222752 Free PMC article.

8

A bayesian statistical algorithm for RNA secondary structure prediction.

Ding Y, Lawrence CE. Ding Y, et al. Among authors: lawrence ce. Comput Chem. 1999 Jun 15;23(3-4):387-400. doi: 10.1016/s0097-8485(99)00010-8. Comput Chem. 1999. PMID: 10404626

9

Gibbs Recursive Sampler: finding transcription factor binding sites.

Thompson W, Rouchka EC, Lawrence CE. Thompson W, et al. Among authors: lawrence ce. Nucleic Acids Res. 2003 Jul 1;31(13):3580-5. doi: 10.1093/nar/gkg608. Nucleic Acids Res. 2003. PMID: 12824370 Free PMC article.

10

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes.

McCue L, Thompson W, Carmack C, Ryan MP, Liu JS, Derbyshire V, Lawrence CE. McCue L, et al. Among authors: lawrence ce. Nucleic Acids Res. 2001 Feb 1;29(3):774-82. doi: 10.1093/nar/29.3.774. Nucleic Acids Res. 2001. PMID: 11160901 Free PMC article.

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