Stormo GD - Search Results

1

The neuropeptide pigment-dispersing factor coordinates pacemaker interactions in the Drosophila circadian system.

Lin Y, Stormo GD, Taghert PH. Lin Y, et al. Among authors: stormo gd. J Neurosci. 2004 Sep 8;24(36):7951-7. doi: 10.1523/JNEUROSCI.2370-04.2004. J Neurosci. 2004. PMID: 15356209 Free PMC article.

2

Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophila melanogaster.

Lin Y, Han M, Shimada B, Wang L, Gibler TM, Amarakone A, Awad TA, Stormo GD, Van Gelder RN, Taghert PH. Lin Y, et al. Among authors: stormo gd. Proc Natl Acad Sci U S A. 2002 Jul 9;99(14):9562-7. doi: 10.1073/pnas.132269699. Epub 2002 Jun 27. Proc Natl Acad Sci U S A. 2002. PMID: 12089325 Free PMC article.

3

Editing efficiency of a Drosophila gene correlates with a distant splice site selection.

Agrawal R, Stormo GD. Agrawal R, et al. Among authors: stormo gd. RNA. 2005 May;11(5):563-6. doi: 10.1261/rna.7280605. RNA. 2005. PMID: 15840811 Free PMC article.

4

Additivity in protein-DNA interactions: how good an approximation is it?

Benos PV, Bulyk ML, Stormo GD. Benos PV, et al. Among authors: stormo gd. Nucleic Acids Res. 2002 Oct 15;30(20):4442-51. doi: 10.1093/nar/gkf578. Nucleic Acids Res. 2002. PMID: 12384591 Free PMC article.

5

Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs.

Foat BC, Stormo GD. Foat BC, et al. Among authors: stormo gd. Mol Syst Biol. 2009;5:268. doi: 10.1038/msb.2009.24. Epub 2009 Apr 28. Mol Syst Biol. 2009. PMID: 19401680 Free PMC article.

6

Improved models for transcription factor binding site identification using nonindependent interactions.

Zhao Y, Ruan S, Pandey M, Stormo GD. Zhao Y, et al. Among authors: stormo gd. Genetics. 2012 Jul;191(3):781-90. doi: 10.1534/genetics.112.138685. Epub 2012 Apr 13. Genetics. 2012. PMID: 22505627 Free PMC article.

7

Discriminative motif optimization based on perceptron training.

Patel RY, Stormo GD. Patel RY, et al. Among authors: stormo gd. Bioinformatics. 2014 Apr 1;30(7):941-8. doi: 10.1093/bioinformatics/btt748. Epub 2013 Dec 24. Bioinformatics. 2014. PMID: 24369152 Free PMC article.

8

Gene-finding approaches for eukaryotes.

Stormo GD. Stormo GD. Genome Res. 2000 Apr;10(4):394-7. doi: 10.1101/gr.10.4.394. Genome Res. 2000. PMID: 10779479 Free article. Review. No abstract available.

9

A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences.

Ji Y, Xu X, Stormo GD. Ji Y, et al. Among authors: stormo gd. Bioinformatics. 2004 Jul 10;20(10):1591-602. doi: 10.1093/bioinformatics/bth131. Epub 2004 Feb 12. Bioinformatics. 2004. PMID: 14962926

10

Novel transcription regulatory elements in Caenorhabditis elegans muscle genes.

GuhaThakurta D, Schriefer LA, Waterston RH, Stormo GD. GuhaThakurta D, et al. Among authors: stormo gd. Genome Res. 2004 Dec;14(12):2457-68. doi: 10.1101/gr.2961104. Genome Res. 2004. PMID: 15574824 Free PMC article.

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