Lombardot T - Search Results

1

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.

Teeling H, Waldmann J, Lombardot T, Bauer M, Glöckner FO. Teeling H, et al. Among authors: lombardot t. BMC Bioinformatics. 2004 Oct 26;5:163. doi: 10.1186/1471-2105-5-163. BMC Bioinformatics. 2004. PMID: 15507136 Free PMC article.

2

MetaLook: a 3D visualisation software for marine ecological genomics.

Lombardot T, Kottmann R, Giuliani G, de Bono A, Addor N, Glöckner FO. Lombardot T, et al. BMC Bioinformatics. 2007 Oct 22;8:406. doi: 10.1186/1471-2105-8-406. BMC Bioinformatics. 2007. PMID: 17953757 Free PMC article.

3

JCoast - a biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes.

Richter M, Lombardot T, Kostadinov I, Kottmann R, Duhaime MB, Peplies J, Glöckner FO. Richter M, et al. Among authors: lombardot t. BMC Bioinformatics. 2008 Apr 1;9:177. doi: 10.1186/1471-2105-9-177. BMC Bioinformatics. 2008. PMID: 18380896 Free PMC article.

4

Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees.

Teeling H, Lombardot T, Bauer M, Ludwig W, Glöckner FO. Teeling H, et al. Among authors: lombardot t. Int J Syst Evol Microbiol. 2004 May;54(Pt 3):791-801. doi: 10.1099/ijs.0.02913-0. Int J Syst Evol Microbiol. 2004. PMID: 15143026

5

The transcriptional regulator pool of the marine bacterium Rhodopirellula baltica SH 1T as revealed by whole genome comparisons.

Lombardot T, Bauer M, Teeling H, Amann R, Glöckner FO. Lombardot T, et al. FEMS Microbiol Lett. 2005 Jan 1;242(1):137-45. doi: 10.1016/j.femsle.2004.10.049. FEMS Microbiol Lett. 2005. PMID: 15621430

6

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum.

Bauer M, Lombardot T, Teeling H, Ward NL, Amann RI, Glöckner FO. Bauer M, et al. Among authors: lombardot t. J Mol Evol. 2004 Nov;59(5):571-86. doi: 10.1007/s00239-004-2643-6. J Mol Evol. 2004. PMID: 15693614

7

Insights into the genomes of archaea mediating the anaerobic oxidation of methane.

Meyerdierks A, Kube M, Lombardot T, Knittel K, Bauer M, Glöckner FO, Reinhardt R, Amann R. Meyerdierks A, et al. Among authors: lombardot t. Environ Microbiol. 2005 Dec;7(12):1937-51. doi: 10.1111/j.1462-2920.2005.00844.x. Environ Microbiol. 2005. PMID: 16309392

8

Megx.net--database resources for marine ecological genomics.

Lombardot T, Kottmann R, Pfeffer H, Richter M, Teeling H, Quast C, Glöckner FO. Lombardot T, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D390-3. doi: 10.1093/nar/gkj070. Nucleic Acids Res. 2006. PMID: 16381894 Free PMC article.

9

MetaMine--a tool to detect and analyse gene patterns in their environmental context.

Bohnebeck U, Lombardot T, Kottmann R, Glöckner FO. Bohnebeck U, et al. Among authors: lombardot t. BMC Bioinformatics. 2008 Oct 28;9:459. doi: 10.1186/1471-2105-9-459. BMC Bioinformatics. 2008. PMID: 18957118 Free PMC article.

10

Clustered genes related to sulfate respiration in uncultured prokaryotes support the theory of their concomitant horizontal transfer.

Mussmann M, Richter M, Lombardot T, Meyerdierks A, Kuever J, Kube M, Glöckner FO, Amann R. Mussmann M, et al. Among authors: lombardot t. J Bacteriol. 2005 Oct;187(20):7126-37. doi: 10.1128/JB.187.20.7126-7137.2005. J Bacteriol. 2005. PMID: 16199583 Free PMC article.

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