Kangas LJ - Search Results

1

Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome.

Qian WJ, Liu T, Monroe ME, Strittmatter EF, Jacobs JM, Kangas LJ, Petritis K, Camp DG 2nd, Smith RD. Qian WJ, et al. Among authors: kangas lj. J Proteome Res. 2005 Jan-Feb;4(1):53-62. doi: 10.1021/pr0498638. J Proteome Res. 2005. PMID: 15707357

2

Use of artificial neural networks for the accurate prediction of peptide liquid chromatography elution times in proteome analyses.

Petritis K, Kangas LJ, Ferguson PL, Anderson GA, Pasa-Tolić L, Lipton MS, Auberry KJ, Strittmatter EF, Shen Y, Zhao R, Smith RD. Petritis K, et al. Among authors: kangas lj. Anal Chem. 2003 Mar 1;75(5):1039-48. doi: 10.1021/ac0205154. Anal Chem. 2003. PMID: 12641221

3

Application of peptide LC retention time information in a discriminant function for peptide identification by tandem mass spectrometry.

Strittmatter EF, Kangas LJ, Petritis K, Mottaz HM, Anderson GA, Shen Y, Jacobs JM, Camp DG 2nd, Smith RD. Strittmatter EF, et al. Among authors: kangas lj. J Proteome Res. 2004 Jul-Aug;3(4):760-9. doi: 10.1021/pr049965y. J Proteome Res. 2004. PMID: 15359729

4

Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.

Petritis K, Kangas LJ, Yan B, Monroe ME, Strittmatter EF, Qian WJ, Adkins JN, Moore RJ, Xu Y, Lipton MS, Camp DG 2nd, Smith RD. Petritis K, et al. Among authors: kangas lj. Anal Chem. 2006 Jul 15;78(14):5026-39. doi: 10.1021/ac060143p. Anal Chem. 2006. PMID: 16841926 Free PMC article.

5

Proteomic characterization of nipple aspirate fluid: identification of potential biomarkers of breast cancer.

Varnum SM, Covington CC, Woodbury RL, Petritis K, Kangas LJ, Abdullah MS, Pounds JG, Smith RD, Zangar RC. Varnum SM, et al. Among authors: kangas lj. Breast Cancer Res Treat. 2003 Jul;80(1):87-97. doi: 10.1023/A:1024479106887. Breast Cancer Res Treat. 2003. PMID: 12889602

6

Machine learning based prediction for peptide drift times in ion mobility spectrometry.

Shah AR, Agarwal K, Baker ES, Singhal M, Mayampurath AM, Ibrahim YM, Kangas LJ, Monroe ME, Zhao R, Belov ME, Anderson GA, Smith RD. Shah AR, et al. Among authors: kangas lj. Bioinformatics. 2010 Jul 1;26(13):1601-7. doi: 10.1093/bioinformatics/btq245. Epub 2010 May 21. Bioinformatics. 2010. PMID: 20495001 Free PMC article.

7

Peptide orientation affects selectivity in ion-exchange chromatography.

Alpert AJ, Petritis K, Kangas L, Smith RD, Mechtler K, Mitulović G, Mohammed S, Heck AJ. Alpert AJ, et al. Anal Chem. 2010 Jun 15;82(12):5253-9. doi: 10.1021/ac100651k. Anal Chem. 2010. PMID: 20481592 Free PMC article.

8

In silico identification software (ISIS): a machine learning approach to tandem mass spectral identification of lipids.

Kangas LJ, Metz TO, Isaac G, Schrom BT, Ginovska-Pangovska B, Wang L, Tan L, Lewis RR, Miller JH. Kangas LJ, et al. Bioinformatics. 2012 Jul 1;28(13):1705-13. doi: 10.1093/bioinformatics/bts194. Epub 2012 May 15. Bioinformatics. 2012. PMID: 22592377 Free PMC article.

9

Artificial neural network for charge prediction in metabolite identification by mass spectrometry.

Miller JH, Schrom BT, Kangas LJ. Miller JH, et al. Among authors: kangas lj. Methods Mol Biol. 2015;1260:89-100. doi: 10.1007/978-1-4939-2239-0_6. Methods Mol Biol. 2015. PMID: 25502377

10

Applications of artificial neural networks (ANNs) in food science.

Huang Y, Kangas LJ, Rasco BA. Huang Y, et al. Among authors: kangas lj. Crit Rev Food Sci Nutr. 2007;47(2):113-26. doi: 10.1080/10408390600626453. Crit Rev Food Sci Nutr. 2007. PMID: 17364697 Review.

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