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The COG database: an updated version includes eukaryotes.
Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Smirnov S, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA. Tatusov RL, et al. Among authors: mazumder r. BMC Bioinformatics. 2003 Sep 11;4:41. doi: 10.1186/1471-2105-4-41. Epub 2003 Sep 11. BMC Bioinformatics. 2003. PMID: 12969510 Free PMC article.
PIRSF: family classification system at the Protein Information Resource.
Wu CH, Nikolskaya A, Huang H, Yeh LS, Natale DA, Vinayaka CR, Hu ZZ, Mazumder R, Kumar S, Kourtesis P, Ledley RS, Suzek BE, Arminski L, Chen Y, Zhang J, Cardenas JL, Chung S, Castro-Alvear J, Dinkov G, Barker WC. Wu CH, et al. Among authors: mazumder r. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D112-4. doi: 10.1093/nar/gkh097. Nucleic Acids Res. 2004. PMID: 14681371 Free PMC article.
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes.
Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Rogozin IB, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA. Koonin EV, et al. Among authors: mazumder r. Genome Biol. 2004;5(2):R7. doi: 10.1186/gb-2004-5-2-r7. Epub 2004 Jan 15. Genome Biol. 2004. PMID: 14759257 Free PMC article.
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Wu CH, Apweiler R, Bairoch A, Natale DA, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, Martin MJ, Mazumder R, O'Donovan C, Redaschi N, Suzek B. Wu CH, et al. Among authors: mazumder r. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D187-91. doi: 10.1093/nar/gkj161. Nucleic Acids Res. 2006. PMID: 16381842 Free PMC article.
An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.
Zhang C, Crasta O, Cammer S, Will R, Kenyon R, Sullivan D, Yu Q, Sun W, Jha R, Liu D, Xue T, Zhang Y, Moore M, McGarvey P, Huang H, Chen Y, Zhang J, Mazumder R, Wu C, Sobral B. Zhang C, et al. Among authors: mazumder r. Nucleic Acids Res. 2008 Jan;36(Database issue):D884-91. doi: 10.1093/nar/gkm903. Epub 2007 Nov 4. Nucleic Acids Res. 2008. PMID: 17984082 Free PMC article.
315 results