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Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides.
Nesvizhskii AI, Roos FF, Grossmann J, Vogelzang M, Eddes JS, Gruissem W, Baginsky S, Aebersold R. Nesvizhskii AI, et al. Among authors: grossmann j. Mol Cell Proteomics. 2006 Apr;5(4):652-70. doi: 10.1074/mcp.M500319-MCP200. Epub 2005 Dec 12. Mol Cell Proteomics. 2006. PMID: 16352522 Free article.
NovoHMM: a hidden Markov model for de novo peptide sequencing.
Fischer B, Roth V, Roos F, Grossmann J, Baginsky S, Widmayer P, Gruissem W, Buhmann JM. Fischer B, et al. Among authors: grossmann j. Anal Chem. 2005 Nov 15;77(22):7265-73. doi: 10.1021/ac0508853. Anal Chem. 2005. PMID: 16285674
AUDENS: a tool for automated peptide de novo sequencing.
Grossmann J, Roos FF, Cieliebak M, Lipták Z, Mathis LK, Müller M, Gruissem W, Baginsky S. Grossmann J, et al. J Proteome Res. 2005 Sep-Oct;4(5):1768-74. doi: 10.1021/pr050070a. J Proteome Res. 2005. PMID: 16212431
Semi-supervised LC/MS alignment for differential proteomics.
Fischer B, Grossmann J, Roth V, Gruissem W, Baginsky S, Buhmann JM. Fischer B, et al. Among authors: grossmann j. Bioinformatics. 2006 Jul 15;22(14):e132-40. doi: 10.1093/bioinformatics/btl219. Bioinformatics. 2006. PMID: 16873463
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).
Reiland S, Finazzi G, Endler A, Willig A, Baerenfaller K, Grossmann J, Gerrits B, Rutishauser D, Gruissem W, Rochaix JD, Baginsky S. Reiland S, et al. Among authors: grossmann j. Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12955-60. doi: 10.1073/pnas.1104734108. Epub 2011 Jul 18. Proc Natl Acad Sci U S A. 2011. PMID: 21768351 Free PMC article.
363 results