Fu XD - Search Results

1

Profiling alternatively spliced mRNA isoforms for prostate cancer classification.

Zhang C, Li HR, Fan JB, Wang-Rodriguez J, Downs T, Fu XD, Zhang MQ. Zhang C, et al. Among authors: fu xd. BMC Bioinformatics. 2006 Apr 11;7:202. doi: 10.1186/1471-2105-7-202. BMC Bioinformatics. 2006. PMID: 16608523 Free PMC article.

2

Profiling alternative splicing on fiber-optic arrays.

Yeakley JM, Fan JB, Doucet D, Luo L, Wickham E, Ye Z, Chee MS, Fu XD. Yeakley JM, et al. Among authors: fu xd. Nat Biotechnol. 2002 Apr;20(4):353-8. doi: 10.1038/nbt0402-353. Nat Biotechnol. 2002. PMID: 11923840

3

A versatile assay for high-throughput gene expression profiling on universal array matrices.

Fan JB, Yeakley JM, Bibikova M, Chudin E, Wickham E, Chen J, Doucet D, Rigault P, Zhang B, Shen R, McBride C, Li HR, Fu XD, Oliphant A, Barker DL, Chee MS. Fan JB, et al. Among authors: fu xd. Genome Res. 2004 May;14(5):878-85. doi: 10.1101/gr.2167504. Genome Res. 2004. PMID: 15123585 Free PMC article.

4

MAASE: an alternative splicing database designed for supporting splicing microarray applications.

Zheng CL, Kwon YS, Li HR, Zhang K, Coutinho-Mansfield G, Yang C, Nair TM, Gribskov M, Fu XD. Zheng CL, et al. Among authors: fu xd. RNA. 2005 Dec;11(12):1767-76. doi: 10.1261/rna.2650905. Epub 2005 Oct 26. RNA. 2005. PMID: 16251387 Free PMC article.

5

Two-dimensional transcriptome profiling: identification of messenger RNA isoform signatures in prostate cancer from archived paraffin-embedded cancer specimens.

Li HR, Wang-Rodriguez J, Nair TM, Yeakley JM, Kwon YS, Bibikova M, Zheng C, Zhou L, Zhang K, Downs T, Fu XD, Fan JB. Li HR, et al. Among authors: fu xd. Cancer Res. 2006 Apr 15;66(8):4079-88. doi: 10.1158/0008-5472.CAN-05-4264. Cancer Res. 2006. PMID: 16618727

6

Sensitive ChIP-DSL technology reveals an extensive estrogen receptor alpha-binding program on human gene promoters.

Kwon YS, Garcia-Bassets I, Hutt KR, Cheng CS, Jin M, Liu D, Benner C, Wang D, Ye Z, Bibikova M, Fan JB, Duan L, Glass CK, Rosenfeld MG, Fu XD. Kwon YS, et al. Among authors: fu xd. Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):4852-7. doi: 10.1073/pnas.0700715104. Epub 2007 Mar 14. Proc Natl Acad Sci U S A. 2007. PMID: 17360330 Free PMC article.

7

Determination of tag density required for digital transcriptome analysis: application to an androgen-sensitive prostate cancer model.

Li H, Lovci MT, Kwon YS, Rosenfeld MG, Fu XD, Yeo GW. Li H, et al. Among authors: fu xd. Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20179-84. doi: 10.1073/pnas.0807121105. Epub 2008 Dec 16. Proc Natl Acad Sci U S A. 2008. PMID: 19088194 Free PMC article.

8

RNA-seq analysis of gene expression and alternative splicing by double-random priming strategy.

Lovci MT, Li HR, Fu XD, Yeo GW. Lovci MT, et al. Among authors: fu xd. Methods Mol Biol. 2011;729:247-55. doi: 10.1007/978-1-61779-065-2_16. Methods Mol Biol. 2011. PMID: 21365495 Free PMC article.

9

A multiplex RNA-seq strategy to profile poly(A+) RNA: application to analysis of transcription response and 3' end formation.

Fox-Walsh K, Davis-Turak J, Zhou Y, Li H, Fu XD. Fox-Walsh K, et al. Among authors: fu xd. Genomics. 2011 Oct;98(4):266-71. doi: 10.1016/j.ygeno.2011.04.003. Epub 2011 Apr 15. Genomics. 2011. PMID: 21515359 Free PMC article.

10

Genome-wide expression assay comparison across frozen and fixed postmortem brain tissue samples.

Chow ML, Li HR, Winn ME, April C, Barnes CC, Wynshaw-Boris A, Fan JB, Fu XD, Courchesne E, Schork NJ. Chow ML, et al. Among authors: fu xd. BMC Genomics. 2011 Sep 10;12:449. doi: 10.1186/1471-2164-12-449. BMC Genomics. 2011. PMID: 21906392 Free PMC article.

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