Chan CY - Search Results

1

Clustering of RNA secondary structures with application to messenger RNAs.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: chan cy. J Mol Biol. 2006 Jun 9;359(3):554-71. doi: 10.1016/j.jmb.2006.01.056. Epub 2006 Feb 2. J Mol Biol. 2006. PMID: 16631786

2

Sfold web server for statistical folding and rational design of nucleic acids.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: chan cy. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W135-41. doi: 10.1093/nar/gkh449. Nucleic Acids Res. 2004. PMID: 15215366 Free PMC article.

3

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble.

Ding Y, Chan CY, Lawrence CE. Ding Y, et al. Among authors: chan cy. RNA. 2005 Aug;11(8):1157-66. doi: 10.1261/rna.2500605. RNA. 2005. PMID: 16043502 Free PMC article.

4

Structure clustering features on the Sfold Web server.

Chan CY, Lawrence CE, Ding Y. Chan CY, et al. Bioinformatics. 2005 Oct 15;21(20):3926-8. doi: 10.1093/bioinformatics/bti632. Epub 2005 Aug 18. Bioinformatics. 2005. PMID: 16109749

5

Potent effect of target structure on microRNA function.

Long D, Lee R, Williams P, Chan CY, Ambros V, Ding Y. Long D, et al. Among authors: chan cy. Nat Struct Mol Biol. 2007 Apr;14(4):287-94. doi: 10.1038/nsmb1226. Epub 2007 Apr 1. Nat Struct Mol Biol. 2007. PMID: 17401373

6

Effect of target secondary structure on RNAi efficiency.

Shao Y, Chan CY, Maliyekkel A, Lawrence CE, Roninson IB, Ding Y. Shao Y, et al. Among authors: chan cy. RNA. 2007 Oct;13(10):1631-40. doi: 10.1261/rna.546207. Epub 2007 Aug 7. RNA. 2007. PMID: 17684233 Free PMC article.

7

Boltzmann ensemble features of RNA secondary structures: a comparative analysis of biological RNA sequences and random shuffles.

Chan CY, Ding Y. Chan CY, et al. J Math Biol. 2008 Jan;56(1-2):93-105. doi: 10.1007/s00285-007-0129-z. Epub 2007 Oct 2. J Math Biol. 2008. PMID: 17909813

8

Rational design and rapid screening of antisense oligonucleotides for prokaryotic gene modulation.

Shao Y, Wu Y, Chan CY, McDonough K, Ding Y. Shao Y, et al. Among authors: chan cy. Nucleic Acids Res. 2006;34(19):5660-9. doi: 10.1093/nar/gkl715. Epub 2006 Oct 11. Nucleic Acids Res. 2006. PMID: 17038332 Free PMC article.

9

A structural analysis of in vitro catalytic activities of hammerhead ribozymes.

Shao Y, Wu S, Chan CY, Klapper JR, Schneider E, Ding Y. Shao Y, et al. Among authors: chan cy. BMC Bioinformatics. 2007 Nov 30;8:469. doi: 10.1186/1471-2105-8-469. BMC Bioinformatics. 2007. PMID: 18053134 Free PMC article.

10

Analysis of microRNA-target interactions by a target structure based hybridization model.

Long D, Chan CY, Ding Y. Long D, et al. Among authors: chan cy. Pac Symp Biocomput. 2008:64-74. Pac Symp Biocomput. 2008. PMID: 18232104 Free article.

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