Park P - Search Results

1

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.

Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF 3rd, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK. Kuo WP, et al. Among authors: park p, park dj. Nat Biotechnol. 2006 Jul;24(7):832-40. doi: 10.1038/nbt1217. Epub 2006 Jul 2. Nat Biotechnol. 2006. PMID: 16823376

2

Linking gene expression data with patient survival times using partial least squares.

Park PJ, Tian L, Kohane IS. Park PJ, et al. Bioinformatics. 2002;18 Suppl 1:S120-7. doi: 10.1093/bioinformatics/18.suppl_1.s120. Bioinformatics. 2002. PMID: 12169539

3

Gene expression levels in different stages of progression in oral squamous cell carcinoma.

Kuo WP, Jenssen TK, Park PJ, Lingen MW, Hasina R, Ohno-Machado L. Kuo WP, et al. Proc AMIA Symp. 2002:415-9. Proc AMIA Symp. 2002. PMID: 12474876 Free PMC article.

4

MicroSAGE is highly representative and reproducible but reveals major differences in gene expression among samples obtained from similar tissues.

Blackshaw S, Kuo WP, Park PJ, Tsujikawa M, Gunnersen JM, Scott HS, Boon WM, Tan SS, Cepko CL. Blackshaw S, et al. Among authors: park pj. Genome Biol. 2003;4(3):R17. doi: 10.1186/gb-2003-4-3-r17. Epub 2003 Feb 18. Genome Biol. 2003. PMID: 12620102 Free PMC article.

5

Microarrays and clinical dentistry.

Kuo WP, Whipple ME, Jenssen TK, Todd R, Epstein JB, Ohno-Machado L, Sonis ST, Park PJ. Kuo WP, et al. J Am Dent Assoc. 2003 Apr;134(4):456-62. doi: 10.14219/jada.archive.2003.0195. J Am Dent Assoc. 2003. PMID: 12733779

6

Functional relationships between gene pairs in oral squamous cell carcinoma.

Kuo WP, Mendez E, Chen C, Whipple ME, Farell G, Agoff N, Park PJ. Kuo WP, et al. AMIA Annu Symp Proc. 2003;2003:371-5. AMIA Annu Symp Proc. 2003. PMID: 14728197 Free PMC article.

7

Current issues for DNA microarrays: platform comparison, double linear amplification, and universal RNA reference.

Park PJ, Cao YA, Lee SY, Kim JW, Chang MS, Hart R, Choi S. Park PJ, et al. J Biotechnol. 2004 Sep 9;112(3):225-45. doi: 10.1016/j.jbiotec.2004.05.006. J Biotechnol. 2004. PMID: 15313001

8

Design and analysis of ChIP-seq experiments for DNA-binding proteins.

Kharchenko PV, Tolstorukov MY, Park PJ. Kharchenko PV, et al. Nat Biotechnol. 2008 Dec;26(12):1351-9. doi: 10.1038/nbt.1508. Epub 2008 Nov 16. Nat Biotechnol. 2008. PMID: 19029915 Free PMC article.

9

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Kharchenko PV, Alekseyenko AA, Schwartz YB, Minoda A, Riddle NC, Ernst J, Sabo PJ, Larschan E, Gorchakov AA, Gu T, Linder-Basso D, Plachetka A, Shanower G, Tolstorukov MY, Luquette LJ, Xi R, Jung YL, Park RW, Bishop EP, Canfield TK, Sandstrom R, Thurman RE, MacAlpine DM, Stamatoyannopoulos JA, Kellis M, Elgin SC, Kuroda MI, Pirrotta V, Karpen GH, Park PJ. Kharchenko PV, et al. Among authors: park pj, park rw. Nature. 2011 Mar 24;471(7339):480-5. doi: 10.1038/nature09725. Epub 2010 Dec 22. Nature. 2011. PMID: 21179089 Free PMC article.

10

hiHMM: Bayesian non-parametric joint inference of chromatin state maps.

Sohn KA, Ho JW, Djordjevic D, Jeong HH, Park PJ, Kim JH. Sohn KA, et al. Bioinformatics. 2015 Jul 1;31(13):2066-74. doi: 10.1093/bioinformatics/btv117. Epub 2015 Feb 27. Bioinformatics. 2015. PMID: 25725496 Free PMC article.

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