Frank A - Search Results

1

Rapid validation of protein identifications with the borderline statistical confidence via de novo sequencing and MS BLAST searches.

Wielsch N, Thomas H, Surendranath V, Waridel P, Frank A, Pevzner P, Shevchenko A. Wielsch N, et al. Among authors: frank a. J Proteome Res. 2006 Sep;5(9):2448-56. doi: 10.1021/pr060200v. J Proteome Res. 2006. PMID: 16944958

2

Waridel P, Frank A, Thomas H, Surendranath V, Sunyaev S, Pevzner P, Shevchenko A. Waridel P, et al. Among authors: frank a. Proteomics. 2007 Jul;7(14):2318-29. doi: 10.1002/pmic.200700003. Proteomics. 2007. PMID: 17623296

3

De novo peptide sequencing and identification with precision mass spectrometry.

Frank AM, Savitski MM, Nielsen ML, Zubarev RA, Pevzner PA. Frank AM, et al. J Proteome Res. 2007 Jan;6(1):114-23. doi: 10.1021/pr060271u. J Proteome Res. 2007. PMID: 17203955 Free PMC article.

4

Clustering millions of tandem mass spectra.

Frank AM, Bandeira N, Shen Z, Tanner S, Briggs SP, Smith RD, Pevzner PA. Frank AM, et al. J Proteome Res. 2008 Jan;7(1):113-22. doi: 10.1021/pr070361e. Epub 2007 Dec 8. J Proteome Res. 2008. PMID: 18067247 Free PMC article.

5

PepNovo: de novo peptide sequencing via probabilistic network modeling.

Frank A, Pevzner P. Frank A, et al. Anal Chem. 2005 Feb 15;77(4):964-73. doi: 10.1021/ac048788h. Anal Chem. 2005. PMID: 15858974

6

Peptide sequence tags for fast database search in mass-spectrometry.

Frank A, Tanner S, Bafna V, Pevzner P. Frank A, et al. J Proteome Res. 2005 Jul-Aug;4(4):1287-95. doi: 10.1021/pr050011x. J Proteome Res. 2005. PMID: 16083278

7

Protein identification by spectral networks analysis.

Bandeira N, Tsur D, Frank A, Pevzner PA. Bandeira N, et al. Among authors: frank a. Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6140-5. doi: 10.1073/pnas.0701130104. Epub 2007 Apr 2. Proc Natl Acad Sci U S A. 2007. PMID: 17404225 Free PMC article.

8

Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra.

Frank AM, Monroe ME, Shah AR, Carver JJ, Bandeira N, Moore RJ, Anderson GA, Smith RD, Pevzner PA. Frank AM, et al. Nat Methods. 2011 May 15;8(7):587-91. doi: 10.1038/nmeth.1609. Nat Methods. 2011. PMID: 21572408 Free PMC article.

9

Interpreting top-down mass spectra using spectral alignment.

Frank AM, Pesavento JJ, Mizzen CA, Kelleher NL, Pevzner PA. Frank AM, et al. Anal Chem. 2008 Apr 1;80(7):2499-505. doi: 10.1021/ac702324u. Epub 2008 Feb 27. Anal Chem. 2008. PMID: 18302345

10

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra.

Tanner S, Shu H, Frank A, Wang LC, Zandi E, Mumby M, Pevzner PA, Bafna V. Tanner S, et al. Among authors: frank a. Anal Chem. 2005 Jul 15;77(14):4626-39. doi: 10.1021/ac050102d. Anal Chem. 2005. PMID: 16013882

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