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SPINE bioinformatics and data-management aspects of high-throughput structural biology.
Albeck S, Alzari P, Andreini C, Banci L, Berry IM, Bertini I, Cambillau C, Canard B, Carter L, Cohen SX, Diprose JM, Dym O, Esnouf RM, Felder C, Ferron F, Guillemot F, Hamer R, Ben Jelloul M, Laskowski RA, Laurent T, Longhi S, Lopez R, Luchinat C, Malet H, Mochel T, Morris RJ, Moulinier L, Oinn T, Pajon A, Peleg Y, Perrakis A, Poch O, Prilusky J, Rachedi A, Ripp R, Rosato A, Silman I, Stuart DI, Sussman JL, Thierry JC, Thompson JD, Thornton JM, Unger T, Vaughan B, Vranken W, Watson JD, Whamond G, Henrick K. Albeck S, et al. Among authors: vranken w. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1184-95. doi: 10.1107/S090744490602991X. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001095 Free PMC article. Review.
Evolution of CRISPR-associated endonucleases as inferred from resurrected proteins.
Alonso-Lerma B, Jabalera Y, Samperio S, Morin M, Fernandez A, Hille LT, Silverstein RA, Quesada-Ganuza A, Reifs A, Fernández-Peñalver S, Benitez Y, Soletto L, Gavira JA, Diaz A, Vranken W, Sanchez-Mejias A, Güell M, Mojica FJM, Kleinstiver BP, Moreno-Pelayo MA, Montoliu L, Perez-Jimenez R. Alonso-Lerma B, et al. Among authors: vranken w. Nat Microbiol. 2023 Jan;8(1):77-90. doi: 10.1038/s41564-022-01265-y. Epub 2023 Jan 2. Nat Microbiol. 2023. PMID: 36593295 Free PMC article.
Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions.
Mészáros B, Hatos A, Palopoli N, Quaglia F, Salladini E, Van Roey K, Arthanari H, Dosztányi Z, Felli IC, Fischer PD, Hoch JC, Jeffries CM, Longhi S, Maiani E, Orchard S, Pancsa R, Papaleo E, Pierattelli R, Piovesan D, Pritisanac I, Tenorio L, Viennet T, Tompa P, Vranken W, Tosatto SCE, Davey NE. Mészáros B, et al. Among authors: vranken w. Nat Methods. 2023 Sep;20(9):1291-1303. doi: 10.1038/s41592-023-01915-x. Epub 2023 Jul 3. Nat Methods. 2023. PMID: 37400558 Review.
Experiences with a training DSW knowledge model for early-stage researchers.
Devignes MD, Smaïl-Tabbone M, Dhondge H, Dolcemascolo R, Gavaldá-García J, Higuera-Rodriguez RA, Kravchenko A, Roca Martínez J, Messini N, Pérez-Ràfols A, Pérez Ropero G, Sperotto L, Chauvot de Beauchêne I, Vranken W. Devignes MD, et al. Among authors: vranken w. Open Res Eur. 2023 Jun 19;3:97. doi: 10.12688/openreseurope.15609.1. eCollection 2023. Open Res Eur. 2023. PMID: 37645489 Free PMC article.
Deciphering the RRM-RNA recognition code: A computational analysis.
Roca-Martínez J, Dhondge H, Sattler M, Vranken WF. Roca-Martínez J, et al. PLoS Comput Biol. 2023 Jan 23;19(1):e1010859. doi: 10.1371/journal.pcbi.1010859. eCollection 2023 Jan. PLoS Comput Biol. 2023. PMID: 36689472 Free PMC article.
124 results