Gu J - Search Results

1

Primary transcripts and expressions of mammal intergenic microRNAs detected by mapping ESTs to their flanking sequences.

Gu J, He T, Pei Y, Li F, Wang X, Zhang J, Zhang X, Li Y. Gu J, et al. Mamm Genome. 2006 Oct;17(10):1033-41. doi: 10.1007/s00335-006-0007-9. Epub 2006 Oct 3. Mamm Genome. 2006. PMID: 17019647

2

MicroRNA identification based on sequence and structure alignment.

Wang X, Zhang J, Li F, Gu J, He T, Zhang X, Li Y. Wang X, et al. Among authors: gu j. Bioinformatics. 2005 Sep 15;21(18):3610-4. doi: 10.1093/bioinformatics/bti562. Epub 2005 Jun 30. Bioinformatics. 2005. PMID: 15994192

3

Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila.

Gu J, Fu H, Zhang X, Li Y. Gu J, et al. BMC Bioinformatics. 2007 Nov 8;8:432. doi: 10.1186/1471-2105-8-432. BMC Bioinformatics. 2007. PMID: 17996040 Free PMC article.

4

Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species.

Wang X, Gu J, Zhang MQ, Li Y. Wang X, et al. Among authors: gu j. Bioinformatics. 2008 Jan 15;24(2):165-71. doi: 10.1093/bioinformatics/btm572. Epub 2007 Nov 24. Bioinformatics. 2008. PMID: 18037683

5

Identification of responsive gene modules by network-based gene clustering and extending: application to inflammation and angiogenesis.

Gu J, Chen Y, Li S, Li Y. Gu J, et al. BMC Syst Biol. 2010 Apr 21;4:47. doi: 10.1186/1752-0509-4-47. BMC Syst Biol. 2010. PMID: 20406493 Free PMC article.

6

Chromatin state and microRNA determine different gene expression dynamics responsive to TNF stimulation.

Li R, Guo W, Gu J, Zhang MQ, Wang X. Li R, et al. Among authors: gu j. Genomics. 2012 Nov;100(5):297-302. doi: 10.1016/j.ygeno.2012.07.009. Epub 2012 Jul 21. Genomics. 2012. PMID: 22824656 Free PMC article.

7

Inferring pathway crosstalk networks using gene set co-expression signatures.

Wang T, Gu J, Yuan J, Tao R, Li Y, Li S. Wang T, et al. Among authors: gu j. Mol Biosyst. 2013 Jul;9(7):1822-8. doi: 10.1039/c3mb25506a. Epub 2013 Apr 17. Mol Biosyst. 2013. PMID: 23591523

8

Inferring the perturbed microRNA regulatory networks in cancer using hierarchical gene co-expression signatures.

Gu J, Xuan Z. Gu J, et al. PLoS One. 2013 Nov 20;8(11):e81032. doi: 10.1371/journal.pone.0081032. eCollection 2013. PLoS One. 2013. PMID: 24278370 Free PMC article.

9

Inferring the perturbed microRNA regulatory networks from gene expression data using a network propagation based method.

Wang T, Gu J, Li Y. Wang T, et al. Among authors: gu j. BMC Bioinformatics. 2014 Jul 29;15(1):255. doi: 10.1186/1471-2105-15-255. BMC Bioinformatics. 2014. PMID: 25069957 Free PMC article.

10

Network embedding-based representation learning for single cell RNA-seq data.

Li X, Chen W, Chen Y, Zhang X, Gu J, Zhang MQ. Li X, et al. Among authors: gu j. Nucleic Acids Res. 2017 Nov 2;45(19):e166. doi: 10.1093/nar/gkx750. Nucleic Acids Res. 2017. PMID: 28977434 Free PMC article.

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