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RNAs everywhere: genome-wide annotation of structured RNAs.
Athanasius F Bompfünewerer Consortium; Backofen R, Bernhart SH, Flamm C, Fried C, Fritzsch G, Hackermüller J, Hertel J, Hofacker IL, Missal K, Mosig A, Prohaska SJ, Rose D, Stadler PF, Tanzer A, Washietl S, Will S. Athanasius F Bompfünewerer Consortium, et al. Among authors: rose d. J Exp Zool B Mol Dev Evol. 2007 Jan 15;308(1):1-25. doi: 10.1002/jez.b.21130. J Exp Zool B Mol Dev Evol. 2007. PMID: 17171697 Review.
Non-coding RNAs in Ciona intestinalis.
Missal K, Rose D, Stadler PF. Missal K, et al. Among authors: rose d. Bioinformatics. 2005 Sep 1;21 Suppl 2:ii77-8. doi: 10.1093/bioinformatics/bti1113. Bioinformatics. 2005. PMID: 16204130
Non-coding RNA annotation of the genome of Trichoplax adhaerens.
Hertel J, de Jong D, Marz M, Rose D, Tafer H, Tanzer A, Schierwater B, Stadler PF. Hertel J, et al. Among authors: rose d. Nucleic Acids Res. 2009 Apr;37(5):1602-15. doi: 10.1093/nar/gkn1084. Epub 2009 Jan 16. Nucleic Acids Res. 2009. PMID: 19151082 Free PMC article.
Computational RNomics of drosophilids.
Rose D, Hackermüller J, Washietl S, Reiche K, Hertel J, Findeiss S, Stadler PF, Prohaska SJ. Rose D, et al. BMC Genomics. 2007 Nov 8;8:406. doi: 10.1186/1471-2164-8-406. BMC Genomics. 2007. PMID: 17996037 Free PMC article.
Duplicated RNA genes in teleost fish genomes.
Rose D, Jöris J, Hackermüller J, Reiche K, Li Q, Stadler PF. Rose D, et al. J Bioinform Comput Biol. 2008 Dec;6(6):1157-75. doi: 10.1142/s0219720008003886. J Bioinform Comput Biol. 2008. PMID: 19090022
Conserved introns reveal novel transcripts in Drosophila melanogaster.
Hiller M, Findeiss S, Lein S, Marz M, Nickel C, Rose D, Schulz C, Backofen R, Prohaska SJ, Reuter G, Stadler PF. Hiller M, et al. Among authors: rose d. Genome Res. 2009 Jul;19(7):1289-300. doi: 10.1101/gr.090050.108. Epub 2009 May 20. Genome Res. 2009. PMID: 19458021 Free PMC article.
2,552 results