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RNAs everywhere: genome-wide annotation of structured RNAs.
Athanasius F Bompfünewerer Consortium; Backofen R, Bernhart SH, Flamm C, Fried C, Fritzsch G, Hackermüller J, Hertel J, Hofacker IL, Missal K, Mosig A, Prohaska SJ, Rose D, Stadler PF, Tanzer A, Washietl S, Will S. Athanasius F Bompfünewerer Consortium, et al. Among authors: washietl s. J Exp Zool B Mol Dev Evol. 2007 Jan 15;308(1):1-25. doi: 10.1002/jez.b.21130. J Exp Zool B Mol Dev Evol. 2007. PMID: 17171697 Review.
RNAz 2.0: improved noncoding RNA detection.
Gruber AR, Findeiß S, Washietl S, Hofacker IL, Stadler PF. Gruber AR, et al. Among authors: washietl s. Pac Symp Biocomput. 2010:69-79. Pac Symp Biocomput. 2010. PMID: 19908359 Free article.
Computational RNomics of drosophilids.
Rose D, Hackermüller J, Washietl S, Reiche K, Hertel J, Findeiss S, Stadler PF, Prohaska SJ. Rose D, et al. Among authors: washietl s. BMC Genomics. 2007 Nov 8;8:406. doi: 10.1186/1471-2164-8-406. BMC Genomics. 2007. PMID: 17996037 Free PMC article.
Identifying structural noncoding RNAs using RNAz.
Washietl S, Hofacker IL. Washietl S, et al. Curr Protoc Bioinformatics. 2007 Sep;Chapter 12:Unit 12.7. doi: 10.1002/0471250953.bi1207s19. Curr Protoc Bioinformatics. 2007. PMID: 18428784
Computational analysis of noncoding RNAs.
Washietl S, Will S, Hendrix DA, Goff LA, Rinn JL, Berger B, Kellis M. Washietl S, et al. Wiley Interdiscip Rev RNA. 2012 Nov-Dec;3(6):759-78. doi: 10.1002/wrna.1134. Epub 2012 Sep 18. Wiley Interdiscip Rev RNA. 2012. PMID: 22991327 Free PMC article. Review.
Structured RNAs in the ENCODE selected regions of the human genome.
Washietl S, Pedersen JS, Korbel JO, Stocsits C, Gruber AR, Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A, Ucla C, Wyss C, Antonarakis SE, Denoeud F, Lagarde J, Drenkow J, Kapranov P, Gingeras TR, Guigó R, Snyder M, Gerstein MB, Reymond A, Hofacker IL, Stadler PF. Washietl S, et al. Genome Res. 2007 Jun;17(6):852-64. doi: 10.1101/gr.5650707. Genome Res. 2007. PMID: 17568003 Free PMC article.
34 results