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Group testing to annihilate pairs applied to DNA cross-hybridization elimination using SYBR Green I.
J Comput Biol. 2007 Jan-Feb;14(1):84-96. doi: 10.1089/cmb.2006.0114.
J Comput Biol. 2007.
PMID: 17381348
New t-gap insertion-deletion-like metrics for DNA hybridization thermodynamic modeling.
D'yachkov AG, Macula AJ, Pogozelski WK, Renz TE, Rykov VV, Torney DC.
D'yachkov AG, et al. Among authors: renz te.
J Comput Biol. 2006 May;13(4):866-81. doi: 10.1089/cmb.2006.13.866.
J Comput Biol. 2006.
PMID: 16761916
Review.
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Free energy gap and statistical thermodynamic fidelity of DNA codes.
Bishop MA, D' Yachkov AG, Macula AJ, Renz TE, Rykov VV.
Bishop MA, et al. Among authors: renz te.
J Comput Biol. 2007 Oct;14(8):1088-104. doi: 10.1089/cmb.2007.0083.
J Comput Biol. 2007.
PMID: 17985989
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New, improved, and practical k-stem sequence similarity measures for probe design.
Macula AJ, Schliep A, Bishop MA, Renz TE.
Macula AJ, et al. Among authors: renz te.
J Comput Biol. 2008 Jun;15(5):525-34. doi: 10.1089/cmb.2007.0208.
J Comput Biol. 2008.
PMID: 18549305
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