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Page 1
Toward a checklist for exchange and interpretation of data from a toxicology study.
Fostel JM, Burgoon L, Zwickl C, Lord P, Corton JC, Bushel PR, Cunningham M, Fan L, Edwards SW, Hester S, Stevens J, Tong W, Waters M, Yang C, Tennant R. Fostel JM, et al. Among authors: bushel pr. Toxicol Sci. 2007 Sep;99(1):26-34. doi: 10.1093/toxsci/kfm090. Epub 2007 Apr 17. Toxicol Sci. 2007. PMID: 17442663
Chemical effects in biological systems--data dictionary (CEBS-DD): a compendium of terms for the capture and integration of biological study design description, conventional phenotypes, and 'omics data.
Fostel J, Choi D, Zwickl C, Morrison N, Rashid A, Hasan A, Bao W, Richard A, Tong W, Bushel PR, Brown R, Bruno M, Cunningham ML, Dix D, Eastin W, Frade C, Garcia A, Heinloth A, Irwin R, Madenspacher J, Merrick BA, Papoian T, Paules R, Rocca-Serra P, Sansone AS, Stevens J, Tomer K, Yang C, Waters M. Fostel J, et al. Among authors: bushel pr. Toxicol Sci. 2005 Dec;88(2):585-601. doi: 10.1093/toxsci/kfi315. Epub 2005 Sep 8. Toxicol Sci. 2005. PMID: 16150882
CEBS--Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data.
Waters M, Stasiewicz S, Merrick BA, Tomer K, Bushel P, Paules R, Stegman N, Nehls G, Yost KJ, Johnson CH, Gustafson SF, Xirasagar S, Xiao N, Huang CC, Boyer P, Chan DD, Pan Q, Gong H, Taylor J, Choi D, Rashid A, Ahmed A, Howle R, Selkirk J, Tennant R, Fostel J. Waters M, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D892-900. doi: 10.1093/nar/gkm755. Epub 2007 Oct 25. Nucleic Acids Res. 2008. PMID: 17962311 Free PMC article.
Gene expression analysis reveals chemical-specific profiles.
Hamadeh HK, Bushel PR, Jayadev S, Martin K, DiSorbo O, Sieber S, Bennett L, Tennant R, Stoll R, Barrett JC, Blanchard K, Paules RS, Afshari CA. Hamadeh HK, et al. Among authors: bushel pr. Toxicol Sci. 2002 Jun;67(2):219-31. doi: 10.1093/toxsci/67.2.219. Toxicol Sci. 2002. PMID: 12011481
Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories.
Boedigheimer MJ, Wolfinger RD, Bass MB, Bushel PR, Chou JW, Cooper M, Corton JC, Fostel J, Hester S, Lee JS, Liu F, Liu J, Qian HR, Quackenbush J, Pettit S, Thompson KL. Boedigheimer MJ, et al. Among authors: bushel pr. BMC Genomics. 2008 Jun 12;9:285. doi: 10.1186/1471-2164-9-285. BMC Genomics. 2008. PMID: 18549499 Free PMC article.
A Collaborative Initiative to Establish Genomic Biomarkers for Assessing Tumorigenic Potential to Reduce Reliance on Conventional Rodent Carcinogenicity Studies.
Corton JC, Mitchell CA, Auerbach S, Bushel P, Ellinger-Ziegelbauer H, Escobar PA, Froetschl R, Harrill AH, Johnson K, Klaunig JE, Pandiri AR, Podtelezhnikov AA, Rager JE, Tanis KQ, van der Laan JW, Vespa A, Yauk CL, Pettit SD, Sistare FD. Corton JC, et al. Toxicol Sci. 2022 Jun 28;188(1):4-16. doi: 10.1093/toxsci/kfac041. Toxicol Sci. 2022. PMID: 35404422 Free PMC article.
122 results