Janezic D - Search Results

1

Car-Parrinello molecular dynamics study of anharmonic systems: a Mannich base in solution.

Jezierska A, Panek J, Borstnik U, Mavri J, Janezic D. Jezierska A, et al. Among authors: janezic d. J Phys Chem B. 2007 May 17;111(19):5243-8. doi: 10.1021/jp068676p. Epub 2007 Apr 21. J Phys Chem B. 2007. PMID: 17447809

2

CROW for large scale macromolecular simulations.

Hodoscek M, Borstnik U, Janezic D. Hodoscek M, et al. Among authors: janezic d. Cell Mol Biol Lett. 2002;7(1):118-9. Cell Mol Biol Lett. 2002. PMID: 11944061

3

Improving the performance of molecular dynamics simulations on parallel clusters.

Borstnik U, Hodoscek M, Janezic D. Borstnik U, et al. Among authors: janezic d. J Chem Inf Comput Sci. 2004 Mar-Apr;44(2):359-64. doi: 10.1021/ci034261e. J Chem Inf Comput Sci. 2004. PMID: 15032512

4

Symplectic molecular dynamics simulations on specially designed parallel computers.

Borstnik U, Janezic D. Borstnik U, et al. Among authors: janezic d. J Chem Inf Model. 2005 Nov-Dec;45(6):1600-4. doi: 10.1021/ci050216q. J Chem Inf Model. 2005. PMID: 16309260

5

The distributed diagonal force decomposition method for parallelizing molecular dynamics simulations.

Borštnik U, Miller BT, Brooks BR, Janežič D. Borštnik U, et al. Among authors: janezic d. J Comput Chem. 2011 Nov 15;32(14):3005-13. doi: 10.1002/jcc.21882. Epub 2011 Jul 26. J Comput Chem. 2011. PMID: 21793007 Free PMC article.

6

Implementation of the force decomposition machine for molecular dynamics simulations.

Borštnik U, Miller BT, Brooks BR, Janežič D. Borštnik U, et al. Among authors: janezic d. J Mol Graph Model. 2012 Sep;38:243-7. doi: 10.1016/j.jmgm.2012.06.015. Epub 2012 Jul 7. J Mol Graph Model. 2012. PMID: 23085166 Free PMC article.

7

Liquid-ordered phase formation in cholesterol/sphingomyelin bilayers: all-atom molecular dynamics simulations.

Zidar J, Merzel F, Hodoscek M, Rebolj K, Sepcić K, Macek P, Janezic D. Zidar J, et al. Among authors: janezic d. J Phys Chem B. 2009 Dec 3;113(48):15795-802. doi: 10.1021/jp907138h. J Phys Chem B. 2009. PMID: 19929009

8

Ion-size effect within the aqueous solution interface at the Pt(111) surface: molecular dynamics studies.

Godec A, Gaberšček M, Jamnik J, Janežič D, Merzel F. Godec A, et al. Among authors: janezic d. Phys Chem Chem Phys. 2010 Nov 7;12(41):13566-73. doi: 10.1039/c004435k. Epub 2010 Sep 20. Phys Chem Chem Phys. 2010. PMID: 20856959

9

New all-atom force field for molecular dynamics simulation of an AlPO(4)-34 molecular sieve.

Praprotnik M, Hocevar S, Hodoscek M, Penca M, Janezic D. Praprotnik M, et al. Among authors: janezic d. J Comput Chem. 2008 Jan 15;29(1):122-9. doi: 10.1002/jcc.20774. J Comput Chem. 2008. PMID: 17546676

10

Microwave catalysis revisited: an analytical solution.

Bren M, Janezic D, Bren U. Bren M, et al. Among authors: janezic d. J Phys Chem A. 2010 Apr 1;114(12):4197-202. doi: 10.1021/jp100374x. J Phys Chem A. 2010. PMID: 20192257

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