Kuo WP - Search Results

1

Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates.

Liu F, Jenssen TK, Trimarchi J, Punzo C, Cepko CL, Ohno-Machado L, Hovig E, Kuo WP. Liu F, et al. Among authors: kuo wp. BMC Genomics. 2007 Jun 7;8:153. doi: 10.1186/1471-2164-8-153. BMC Genomics. 2007. PMID: 17555589 Free PMC article.

2

Validation of oligoarrays for quantitative exploration of the transcriptome.

Nygaard V, Liu F, Holden M, Kuo WP, Trimarchi J, Ohno-Machado L, Cepko CL, Frigessi A, Glad IK, Wiel MA, Hovig E, Lyng H. Nygaard V, et al. Among authors: kuo wp. BMC Genomics. 2008 May 30;9:258. doi: 10.1186/1471-2164-9-258. BMC Genomics. 2008. PMID: 18513391 Free PMC article.

3

Performance comparison of multiple microarray platforms for gene expression profiling.

Liu F, Kuo WP, Jenssen TK, Hovig E. Liu F, et al. Among authors: kuo wp. Methods Mol Biol. 2012;802:141-55. doi: 10.1007/978-1-61779-400-1_10. Methods Mol Biol. 2012. PMID: 22130879

4

A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.

Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF 3rd, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK. Kuo WP, et al. Nat Biotechnol. 2006 Jul;24(7):832-40. doi: 10.1038/nbt1217. Epub 2006 Jul 2. Nat Biotechnol. 2006. PMID: 16823376

5

Analysis of repeatability in spotted cDNA microarrays.

Jenssen TK, Langaas M, Kuo WP, Smith-Sørensen B, Myklebost O, Hovig E. Jenssen TK, et al. Among authors: kuo wp. Nucleic Acids Res. 2002 Jul 15;30(14):3235-44. doi: 10.1093/nar/gkf441. Nucleic Acids Res. 2002. PMID: 12136105 Free PMC article.

6

AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm.

Kim J, Patel K, Jung H, Kuo WP, Ohno-Machado L. Kim J, et al. Among authors: kuo wp. BMC Bioinformatics. 2011 Mar 17;12:75. doi: 10.1186/1471-2105-12-75. BMC Bioinformatics. 2011. PMID: 21410990 Free PMC article.

7

Analysis of matched mRNA measurements from two different microarray technologies.

Kuo WP, Jenssen TK, Butte AJ, Ohno-Machado L, Kohane IS. Kuo WP, et al. Bioinformatics. 2002 Mar;18(3):405-12. doi: 10.1093/bioinformatics/18.3.405. Bioinformatics. 2002. PMID: 11934739

8

A primer on gene expression and microarrays for machine learning researchers.

Kuo WP, Kim EY, Trimarchi J, Jenssen TK, Vinterbo SA, Ohno-Machado L. Kuo WP, et al. J Biomed Inform. 2004 Aug;37(4):293-303. doi: 10.1016/j.jbi.2004.07.002. J Biomed Inform. 2004. PMID: 15465482 Free article. Review.

9

Peripheral arterial occlusive disease: global gene expression analyses suggest a major role for immune and inflammatory responses.

Fu S, Zhao H, Shi J, Abzhanov A, Crawford K, Ohno-Machado L, Zhou J, Du Y, Kuo WP, Zhang J, Jiang M, Jin JG. Fu S, et al. Among authors: kuo wp. BMC Genomics. 2008 Aug 1;9:369. doi: 10.1186/1471-2164-9-369. BMC Genomics. 2008. PMID: 18673543 Free PMC article.

10

Gene expression profiling by DNA microarrays and its application to dental research.

Kuo WP, Whipple ME, Sonis ST, Ohno-Machado L, Jenssen TK. Kuo WP, et al. Oral Oncol. 2002 Oct;38(7):650-6. doi: 10.1016/s1368-8375(02)00013-1. Oral Oncol. 2002. PMID: 12353490 Review.

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