Barrasa MI - Search Results

1

Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping.

Vermeirssen V, Deplancke B, Barrasa MI, Reece-Hoyes JS, Arda HE, Grove CA, Martinez NJ, Sequerra R, Doucette-Stamm L, Brent MR, Walhout AJ. Vermeirssen V, et al. Among authors: barrasa mi. Nat Methods. 2007 Aug;4(8):659-64. doi: 10.1038/nmeth1063. Epub 2007 Jun 24. Nat Methods. 2007. PMID: 17589517

2

Transcription factor modularity in a gene-centered C. elegans core neuronal protein-DNA interaction network.

Vermeirssen V, Barrasa MI, Hidalgo CA, Babon JA, Sequerra R, Doucette-Stamm L, Barabási AL, Walhout AJ. Vermeirssen V, et al. Among authors: barrasa mi. Genome Res. 2007 Jul;17(7):1061-71. doi: 10.1101/gr.6148107. Epub 2007 May 18. Genome Res. 2007. PMID: 17513831 Free PMC article.

3

A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity.

Martinez NJ, Ow MC, Barrasa MI, Hammell M, Sequerra R, Doucette-Stamm L, Roth FP, Ambros VR, Walhout AJ. Martinez NJ, et al. Among authors: barrasa mi. Genes Dev. 2008 Sep 15;22(18):2535-49. doi: 10.1101/gad.1678608. Genes Dev. 2008. PMID: 18794350 Free PMC article.

4

Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity.

Martinez NJ, Ow MC, Reece-Hoyes JS, Barrasa MI, Ambros VR, Walhout AJ. Martinez NJ, et al. Among authors: barrasa mi. Genome Res. 2008 Dec;18(12):2005-15. doi: 10.1101/gr.083055.108. Epub 2008 Nov 3. Genome Res. 2008. PMID: 18981266 Free PMC article.

5

The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factors.

Reece-Hoyes JS, Deplancke B, Barrasa MI, Hatzold J, Smit RB, Arda HE, Pope PA, Gaudet J, Conradt B, Walhout AJ. Reece-Hoyes JS, et al. Among authors: barrasa mi. Nucleic Acids Res. 2009 Jun;37(11):3689-98. doi: 10.1093/nar/gkp232. Epub 2009 Apr 16. Nucleic Acids Res. 2009. PMID: 19372275 Free PMC article.

6

A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors.

Grove CA, De Masi F, Barrasa MI, Newburger DE, Alkema MJ, Bulyk ML, Walhout AJ. Grove CA, et al. Among authors: barrasa mi. Cell. 2009 Jul 23;138(2):314-27. doi: 10.1016/j.cell.2009.04.058. Cell. 2009. PMID: 19632181 Free PMC article.

7

EDGEdb: a transcription factor-DNA interaction database for the analysis of C. elegans differential gene expression.

Barrasa MI, Vaglio P, Cavasino F, Jacotot L, Walhout AJ. Barrasa MI, et al. BMC Genomics. 2007 Jan 18;8:21. doi: 10.1186/1471-2164-8-21. BMC Genomics. 2007. PMID: 17233892 Free PMC article.

8

The FLYWCH transcription factors FLH-1, FLH-2, and FLH-3 repress embryonic expression of microRNA genes in C. elegans.

Ow MC, Martinez NJ, Olsen PH, Silverman HS, Barrasa MI, Conradt B, Walhout AJ, Ambros V. Ow MC, et al. Among authors: barrasa mi. Genes Dev. 2008 Sep 15;22(18):2520-34. doi: 10.1101/gad.1678808. Genes Dev. 2008. PMID: 18794349 Free PMC article.

9

Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complex.

Tabuchi TM, Deplancke B, Osato N, Zhu LJ, Barrasa MI, Harrison MM, Horvitz HR, Walhout AJ, Hagstrom KA. Tabuchi TM, et al. Among authors: barrasa mi. PLoS Genet. 2011 May;7(5):e1002074. doi: 10.1371/journal.pgen.1002074. Epub 2011 May 12. PLoS Genet. 2011. PMID: 21589891 Free PMC article.

10

Parkinson-associated risk variant in distal enhancer of α-synuclein modulates target gene expression.

Soldner F, Stelzer Y, Shivalila CS, Abraham BJ, Latourelle JC, Barrasa MI, Goldmann J, Myers RH, Young RA, Jaenisch R. Soldner F, et al. Among authors: barrasa mi. Nature. 2016 May 5;533(7601):95-9. doi: 10.1038/nature17939. Epub 2016 Apr 20. Nature. 2016. PMID: 27096366 Free PMC article.

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