Deplancke B - Search Results

1

Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping.

Vermeirssen V, Deplancke B, Barrasa MI, Reece-Hoyes JS, Arda HE, Grove CA, Martinez NJ, Sequerra R, Doucette-Stamm L, Brent MR, Walhout AJ. Vermeirssen V, et al. Among authors: deplancke b. Nat Methods. 2007 Aug;4(8):659-64. doi: 10.1038/nmeth1063. Epub 2007 Jun 24. Nat Methods. 2007. PMID: 17589517

2

Single-cell biology: what does the future hold?

Polychronidou M, Hou J, Babu MM, Liberali P, Amit I, Deplancke B, Lahav G, Itzkovitz S, Mann M, Saez-Rodriguez J, Theis F, Eils R. Polychronidou M, et al. Among authors: deplancke b. Mol Syst Biol. 2023 Jul 11;19(7):e11799. doi: 10.15252/msb.202311799. Epub 2023 Jun 15. Mol Syst Biol. 2023. PMID: 37318792 Free PMC article.

3

A gateway-compatible yeast one-hybrid system.

Deplancke B, Dupuy D, Vidal M, Walhout AJ. Deplancke B, et al. Genome Res. 2004 Oct;14(10B):2093-101. doi: 10.1101/gr.2445504. Genome Res. 2004. PMID: 15489331 Free PMC article.

4

A first version of the Caenorhabditis elegans Promoterome.

Dupuy D, Li QR, Deplancke B, Boxem M, Hao T, Lamesch P, Sequerra R, Bosak S, Doucette-Stamm L, Hope IA, Hill DE, Walhout AJ, Vidal M. Dupuy D, et al. Among authors: deplancke b. Genome Res. 2004 Oct;14(10B):2169-75. doi: 10.1101/gr.2497604. Genome Res. 2004. PMID: 15489340 Free PMC article.

5

C. elegans tubby regulates life span and fat storage by two independent mechanisms.

Mukhopadhyay A, Deplancke B, Walhout AJ, Tissenbaum HA. Mukhopadhyay A, et al. Among authors: deplancke b. Cell Metab. 2005 Jul;2(1):35-42. doi: 10.1016/j.cmet.2005.06.004. Cell Metab. 2005. PMID: 16054097 Free article.

6

A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks.

Reece-Hoyes JS, Deplancke B, Shingles J, Grove CA, Hope IA, Walhout AJ. Reece-Hoyes JS, et al. Among authors: deplancke b. Genome Biol. 2005;6(13):R110. doi: 10.1186/gb-2005-6-13-r110. Epub 2005 Dec 30. Genome Biol. 2005. PMID: 16420670 Free PMC article.

7

A gene-centered C. elegans protein-DNA interaction network.

Deplancke B, Mukhopadhyay A, Ao W, Elewa AM, Grove CA, Martinez NJ, Sequerra R, Doucette-Stamm L, Reece-Hoyes JS, Hope IA, Tissenbaum HA, Mango SE, Walhout AJ. Deplancke B, et al. Cell. 2006 Jun 16;125(6):1193-205. doi: 10.1016/j.cell.2006.04.038. Cell. 2006. PMID: 16777607 Free article.

8

C. elegans 14-3-3 proteins regulate life span and interact with SIR-2.1 and DAF-16/FOXO.

Wang Y, Oh SW, Deplancke B, Luo J, Walhout AJ, Tissenbaum HA. Wang Y, et al. Among authors: deplancke b. Mech Ageing Dev. 2006 Sep;127(9):741-7. doi: 10.1016/j.mad.2006.05.005. Epub 2006 Jul 24. Mech Ageing Dev. 2006. PMID: 16860373

9

Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans.

Mukhopadhyay A, Deplancke B, Walhout AJ, Tissenbaum HA. Mukhopadhyay A, et al. Among authors: deplancke b. Nat Protoc. 2008;3(4):698-709. doi: 10.1038/nprot.2008.38. Nat Protoc. 2008. PMID: 18388953 Free PMC article.

10

The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factors.

Reece-Hoyes JS, Deplancke B, Barrasa MI, Hatzold J, Smit RB, Arda HE, Pope PA, Gaudet J, Conradt B, Walhout AJ. Reece-Hoyes JS, et al. Among authors: deplancke b. Nucleic Acids Res. 2009 Jun;37(11):3689-98. doi: 10.1093/nar/gkp232. Epub 2009 Apr 16. Nucleic Acids Res. 2009. PMID: 19372275 Free PMC article.

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