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Page 1
The EADGENE Microarray Data Analysis Workshop (open access publication).
de Koning DJ, Jaffrézic F, Lund MS, Watson M, Channing C, Hulsegge I, Pool MH, Buitenhuis B, Hedegaard J, Hornshøj H, Jiang L, Sørensen P, Marot G, Delmas C, Lê Cao KA, San Cristobal M, Baron MD, Malinverni R, Stella A, Brunner RM, Seyfert HM, Jensen K, Mouzaki D, Waddington D, Jiménez-Marín A, Pérez-Alegre M, Pérez-Reinado E, Closset R, Detilleux JC, Dovc P, Lavric M, Nie H, Janss L. de Koning DJ, et al. Among authors: nie h. Genet Sel Evol. 2007 Nov-Dec;39(6):621-31. doi: 10.1186/1297-9686-39-6-621. Epub 2007 Dec 6. Genet Sel Evol. 2007. PMID: 18053572 Free PMC article.
Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication).
Jaffrézic F, de Koning DJ, Boettcher PJ, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Detilleux JC, Dovc P, Duval M, Foulley JL, Hedegaard J, Hornshøj H, Hulsegge I, Janss L, Jensen K, Jiang L, Lavric M, Lê Cao KA, Lund MS, Malinverni R, Marot G, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, van Schothorst EM, Schuberth HJ, Sørensen P, Stella A, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H, Seyfert HM. Jaffrézic F, et al. Among authors: nie h. Genet Sel Evol. 2007 Nov-Dec;39(6):633-50. doi: 10.1186/1297-9686-39-6-633. Epub 2007 Dec 6. Genet Sel Evol. 2007. PMID: 18053573 Free PMC article.
Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication).
Sørensen P, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Duval M, Glass L, Hedegaard J, Hornshøj H, Hulsegge I, Jaffrézic F, Jensen K, Jiang L, de Koning DJ, Lê Cao KA, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, Lund MS, van Schothorst EM, Schuberth HJ, Seyfert HM, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H. Sørensen P, et al. Among authors: nie h. Genet Sel Evol. 2007 Nov-Dec;39(6):651-68. doi: 10.1186/1297-9686-39-6-651. Epub 2007 Dec 6. Genet Sel Evol. 2007. PMID: 18053574 Free PMC article.
Methods for interpreting lists of affected genes obtained in a DNA microarray experiment.
Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M, Conley LN, SanCristobal M, Ferrari F, Garrido JJ, Groenen MA, Hornshøj H, Hulsegge I, Jiang L, Jiménez-Marín Á, Kommadath A, Lagarrigue S, Leunissen JA, Liaubet L, Neerincx PB, Nie H, Poel JV, Prickett D, Ramirez-Boo M, Rebel JM, Robert-Granié C, Skarman A, Smits MA, Sørensen P, Tosser-Klopp G, Watson M. Hedegaard J, et al. Among authors: nie h. BMC Proc. 2009 Jul 16;3 Suppl 4(Suppl 4):S5. doi: 10.1186/1753-6561-3-s4-s5. BMC Proc. 2009. PMID: 19615118 Free PMC article.
Highly effective SNP-based association mapping and management of recessive defects in livestock.
Charlier C, Coppieters W, Rollin F, Desmecht D, Agerholm JS, Cambisano N, Carta E, Dardano S, Dive M, Fasquelle C, Frennet JC, Hanset R, Hubin X, Jorgensen C, Karim L, Kent M, Harvey K, Pearce BR, Simon P, Tama N, Nie H, Vandeputte S, Lien S, Longeri M, Fredholm M, Harvey RJ, Georges M. Charlier C, et al. Among authors: nie h. Nat Genet. 2008 Apr;40(4):449-54. doi: 10.1038/ng.96. Epub 2008 Mar 16. Nat Genet. 2008. PMID: 18344998 Free article.
Microarray data mining using Bioconductor packages.
Nie H, Neerincx PB, van der Poel J, Ferrari F, Bicciato S, Leunissen JA, Groenen MA. Nie H, et al. BMC Proc. 2009 Jul 16;3 Suppl 4(Suppl 4):S9. doi: 10.1186/1753-6561-3-S4-S9. BMC Proc. 2009. PMID: 19615122 Free PMC article.
2,074 results