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Page 1
Activities and sensitivities in boolean network models.
Shmulevich I, Kauffman SA. Shmulevich I, et al. Among authors: kauffman sa. Phys Rev Lett. 2004 Jul 23;93(4):048701. doi: 10.1103/PhysRevLett.93.048701. Epub 2004 Jul 22. Phys Rev Lett. 2004. PMID: 15323803 Free PMC article.
Eukaryotic cells are dynamically ordered or critical but not chaotic.
Shmulevich I, Kauffman SA, Aldana M. Shmulevich I, et al. Among authors: kauffman sa. Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13439-44. doi: 10.1073/pnas.0506771102. Epub 2005 Sep 9. Proc Natl Acad Sci U S A. 2005. PMID: 16155121 Free PMC article.
Gene expression dynamics in the macrophage exhibit criticality.
Nykter M, Price ND, Aldana M, Ramsey SA, Kauffman SA, Hood LE, Yli-Harja O, Shmulevich I. Nykter M, et al. Among authors: kauffman sa. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):1897-900. doi: 10.1073/pnas.0711525105. Epub 2008 Feb 4. Proc Natl Acad Sci U S A. 2008. PMID: 18250330 Free PMC article.
Gene-pair expression signatures reveal lineage control.
Heinäniemi M, Nykter M, Kramer R, Wienecke-Baldacchino A, Sinkkonen L, Zhou JX, Kreisberg R, Kauffman SA, Huang S, Shmulevich I. Heinäniemi M, et al. Among authors: kauffman sa. Nat Methods. 2013 Jun;10(6):577-83. doi: 10.1038/nmeth.2445. Epub 2013 Apr 21. Nat Methods. 2013. PMID: 23603899 Free PMC article.
Complexity data science: A spin-off from digital twins.
Emmert-Streib F, Cherifi H, Kaski K, Kauffman S, Yli-Harja O. Emmert-Streib F, et al. PNAS Nexus. 2024 Nov 12;3(11):pgae456. doi: 10.1093/pnasnexus/pgae456. eCollection 2024 Nov. PNAS Nexus. 2024. PMID: 39534652 Free PMC article.
133 results