Kobitski AY - Search Results

1

Sculpting an RNA conformational energy landscape by a methyl group modification--a single-molecule FRET study.

Kobitski AY, Hengesbach M, Helm M, Nienhaus GU. Kobitski AY, et al. Angew Chem Int Ed Engl. 2008;47(23):4326-30. doi: 10.1002/anie.200705675. Angew Chem Int Ed Engl. 2008. PMID: 18449867 No abstract available.

2

Mg2+-dependent folding of a Diels-Alderase ribozyme probed by single-molecule FRET analysis.

Kobitski AY, Nierth A, Helm M, Jäschke A, Nienhaus GU. Kobitski AY, et al. Nucleic Acids Res. 2007;35(6):2047-59. doi: 10.1093/nar/gkm072. Epub 2007 Mar 7. Nucleic Acids Res. 2007. PMID: 17344321 Free PMC article.

3

A methyl group controls conformational equilibrium in human mitochondrial tRNA(Lys).

Voigts-Hoffmann F, Hengesbach M, Kobitski AY, van Aerschot A, Herdewijn P, Nienhaus GU, Helm M. Voigts-Hoffmann F, et al. Among authors: kobitski ay. J Am Chem Soc. 2007 Nov 7;129(44):13382-3. doi: 10.1021/ja075520+. Epub 2007 Oct 17. J Am Chem Soc. 2007. PMID: 17941640 No abstract available.

4

RNA intramolecular dynamics by single-molecule FRET.

Hengesbach M, Kobitski A, Voigts-Hoffmann F, Frauer C, Nienhaus GU, Helm M. Hengesbach M, et al. Curr Protoc Nucleic Acid Chem. 2008 Sep;Chapter 11:Unit 11.12. doi: 10.1002/0471142700.nc1112s34. Curr Protoc Nucleic Acid Chem. 2008. PMID: 18819081

5

Anthracene-BODIPY dyads as fluorescent sensors for biocatalytic Diels-Alder reactions.

Nierth A, Kobitski AY, Nienhaus GU, Jäschke A. Nierth A, et al. Among authors: kobitski ay. J Am Chem Soc. 2010 Mar 3;132(8):2646-54. doi: 10.1021/ja9084397. J Am Chem Soc. 2010. PMID: 20131767

6

Evidence of a folding intermediate in RNase H from single-molecule FRET experiments.

Rieger R, Kobitski A, Sielaff H, Nienhaus GU. Rieger R, et al. Chemphyschem. 2011 Feb 25;12(3):627-33. doi: 10.1002/cphc.201000693. Epub 2010 Nov 9. Chemphyschem. 2011. PMID: 21344597

7

Single-molecule FRET studies of counterion effects on the free energy landscape of human mitochondrial lysine tRNA.

Dammertz K, Hengesbach M, Helm M, Nienhaus GU, Kobitski AY. Dammertz K, et al. Among authors: kobitski ay. Biochemistry. 2011 Apr 19;50(15):3107-15. doi: 10.1021/bi101804t. Epub 2011 Mar 24. Biochemistry. 2011. PMID: 21375355

8

Single-molecule FRET reveals a cooperative effect of two methyl group modifications in the folding of human mitochondrial tRNA(Lys).

Kobitski AY, Hengesbach M, Seidu-Larry S, Dammertz K, Chow CS, van Aerschot A, Nienhaus GU, Helm M. Kobitski AY, et al. Chem Biol. 2011 Jul 29;18(7):928-36. doi: 10.1016/j.chembiol.2011.03.016. Chem Biol. 2011. PMID: 21802013

9

Three critical hydrogen bonds determine the catalytic activity of the Diels-Alderase ribozyme.

Kraut S, Bebenroth D, Nierth A, Kobitski AY, Nienhaus GU, Jäschke A. Kraut S, et al. Among authors: kobitski ay. Nucleic Acids Res. 2012 Feb;40(3):1318-30. doi: 10.1093/nar/gkr812. Epub 2011 Oct 5. Nucleic Acids Res. 2012. PMID: 21976731 Free PMC article.

10

Single-molecule FRET studies of RNA folding: a Diels-Alderase ribozyme with photolabile nucleotide modifications.

Kobitski AY, Schäfer S, Nierth A, Singer M, Jäschke A, Nienhaus GU. Kobitski AY, et al. J Phys Chem B. 2013 Oct 24;117(42):12800-6. doi: 10.1021/jp402005m. Epub 2013 May 10. J Phys Chem B. 2013. PMID: 23621553

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