Chubukov V - Search Results

1

Dynamics and design principles of a basic regulatory architecture controlling metabolic pathways.

Chin CS, Chubukov V, Jolly ER, DeRisi J, Li H. Chin CS, et al. Among authors: chubukov v. PLoS Biol. 2008 Jun 17;6(6):e146. doi: 10.1371/journal.pbio.0060146. PLoS Biol. 2008. PMID: 18563967 Free PMC article.

2

Regulatory architecture determines optimal regulation of gene expression in metabolic pathways.

Chubukov V, Zuleta IA, Li H. Chubukov V, et al. Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):5127-32. doi: 10.1073/pnas.1114235109. Epub 2012 Mar 13. Proc Natl Acad Sci U S A. 2012. PMID: 22416120 Free PMC article.

3

A Method to Constrain Genome-Scale Models with 13C Labeling Data.

Martín HG, Kumar VS, Weaver D, Ghosh A, Chubukov V, Mukhopadhyay A, Arkin A, Keasling JD. Martín HG, et al. Among authors: chubukov v. PLoS Comput Biol. 2015 Sep 17;11(9):e1004363. doi: 10.1371/journal.pcbi.1004363. eCollection 2015 Sep. PLoS Comput Biol. 2015. PMID: 26379153 Free PMC article.

4

Somewhat in control--the role of transcription in regulating microbial metabolic fluxes.

Kochanowski K, Sauer U, Chubukov V. Kochanowski K, et al. Among authors: chubukov v. Curr Opin Biotechnol. 2013 Dec;24(6):987-93. doi: 10.1016/j.copbio.2013.03.014. Epub 2013 Apr 6. Curr Opin Biotechnol. 2013. PMID: 23571096

5

Synthetic and systems biology for microbial production of commodity chemicals.

Chubukov V, Mukhopadhyay A, Petzold CJ, Keasling JD, Martín HG. Chubukov V, et al. NPJ Syst Biol Appl. 2016 Apr 7;2:16009. doi: 10.1038/npjsba.2016.9. eCollection 2016. NPJ Syst Biol Appl. 2016. PMID: 28725470 Free PMC article. Review.

6

Acute Limonene Toxicity in Escherichia coli Is Caused by Limonene Hydroperoxide and Alleviated by a Point Mutation in Alkyl Hydroperoxidase AhpC.

Chubukov V, Mingardon F, Schackwitz W, Baidoo EE, Alonso-Gutierrez J, Hu Q, Lee TS, Keasling JD, Mukhopadhyay A. Chubukov V, et al. Appl Environ Microbiol. 2015 Jul;81(14):4690-6. doi: 10.1128/AEM.01102-15. Epub 2015 May 1. Appl Environ Microbiol. 2015. PMID: 25934627 Free PMC article.

7

Engineering glucose metabolism of Escherichia coli under nitrogen starvation.

Chubukov V, Desmarais JJ, Wang G, Chan LJG, Baidoo EE, Petzold CJ, Keasling JD, Mukhopadhyay A. Chubukov V, et al. NPJ Syst Biol Appl. 2017 Jan 5;3:16035. doi: 10.1038/npjsba.2016.35. eCollection 2017. NPJ Syst Biol Appl. 2017. PMID: 28725483 Free PMC article.

8

Improving membrane protein expression and function using genomic edits.

Jensen HM, Eng T, Chubukov V, Herbert RA, Mukhopadhyay A. Jensen HM, et al. Among authors: chubukov v. Sci Rep. 2017 Oct 12;7(1):13030. doi: 10.1038/s41598-017-12901-7. Sci Rep. 2017. PMID: 29026162 Free PMC article.

9

Coordination of microbial metabolism.

Chubukov V, Gerosa L, Kochanowski K, Sauer U. Chubukov V, et al. Nat Rev Microbiol. 2014 May;12(5):327-40. doi: 10.1038/nrmicro3238. Epub 2014 Mar 24. Nat Rev Microbiol. 2014. PMID: 24658329 Review.

10

Environmental dependence of stationary-phase metabolism in Bacillus subtilis and Escherichia coli.

Chubukov V, Sauer U. Chubukov V, et al. Appl Environ Microbiol. 2014 May;80(9):2901-9. doi: 10.1128/AEM.00061-14. Epub 2014 Feb 28. Appl Environ Microbiol. 2014. PMID: 24584250 Free PMC article.

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