Gill RT - Search Results

1

The topology of the bacterial co-conserved protein network and its implications for predicting protein function.

Karimpour-Fard A, Leach SM, Hunter LE, Gill RT. Karimpour-Fard A, et al. Among authors: gill rt. BMC Genomics. 2008 Jun 30;9:313. doi: 10.1186/1471-2164-9-313. BMC Genomics. 2008. PMID: 18590549 Free PMC article.

2

Cross-species cluster co-conservation: a new method for generating protein interaction networks.

Karimpour-Fard A, Detweiler CS, Erickson KD, Hunter L, Gill RT. Karimpour-Fard A, et al. Among authors: gill rt. Genome Biol. 2007;8(9):R185. doi: 10.1186/gb-2007-8-9-r185. Genome Biol. 2007. PMID: 17803817 Free PMC article.

3

Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling.

Karimpour-Fard A, Hunter L, Gill RT. Karimpour-Fard A, et al. Among authors: gill rt. BMC Genomics. 2007 Oct 29;8:393. doi: 10.1186/1471-2164-8-393. BMC Genomics. 2007. PMID: 17967189 Free PMC article.

4

Predicting protein linkages in bacteria: which method is best depends on task.

Karimpour-Fard A, Leach SM, Gill RT, Hunter LE. Karimpour-Fard A, et al. Among authors: gill rt. BMC Bioinformatics. 2008 Sep 24;9:397. doi: 10.1186/1471-2105-9-397. BMC Bioinformatics. 2008. PMID: 18816389 Free PMC article.

5

A comparison of alternative 60-mer probe designs in an in-situ synthesized oligonucleotide microarray.

Leiske DL, Karimpour-Fard A, Hume PS, Fairbanks BD, Gill RT. Leiske DL, et al. Among authors: gill rt. BMC Genomics. 2006 Apr 4;7:72. doi: 10.1186/1471-2164-7-72. BMC Genomics. 2006. PMID: 16595014 Free PMC article.

6

Increased mutation frequency in redox-impaired Escherichia coli due to RelA- and RpoS-mediated repression of DNA repair.

Singh A, Karimpour-Fard A, Gill RT. Singh A, et al. Among authors: gill rt. Appl Environ Microbiol. 2010 Aug;76(16):5463-70. doi: 10.1128/AEM.00583-10. Epub 2010 Jun 25. Appl Environ Microbiol. 2010. PMID: 20581184 Free PMC article.

7

Genome-scale identification and characterization of ethanol tolerance genes in Escherichia coli.

Woodruff LB, Pandhal J, Ow SY, Karimpour-Fard A, Weiss SJ, Wright PC, Gill RT. Woodruff LB, et al. Among authors: gill rt. Metab Eng. 2013 Jan;15:124-33. doi: 10.1016/j.ymben.2012.10.007. Epub 2012 Nov 17. Metab Eng. 2013. PMID: 23164575

8

Rapid profiling of a microbial genome using mixtures of barcoded oligonucleotides.

Warner JR, Reeder PJ, Karimpour-Fard A, Woodruff LB, Gill RT. Warner JR, et al. Among authors: gill rt. Nat Biotechnol. 2010 Aug;28(8):856-62. doi: 10.1038/nbt.1653. Epub 2010 Jul 18. Nat Biotechnol. 2010. PMID: 20639866

9

A genomics approach to improve the analysis and design of strain selections.

Warnecke TE, Lynch MD, Karimpour-Fard A, Sandoval N, Gill RT. Warnecke TE, et al. Among authors: gill rt. Metab Eng. 2008 May-Jul;10(3-4):154-65. doi: 10.1016/j.ymben.2008.04.004. Epub 2008 May 9. Metab Eng. 2008. PMID: 18514004

10

Rapid dissection of a complex phenotype through genomic-scale mapping of fitness altering genes.

Warnecke TE, Lynch MD, Karimpour-Fard A, Lipscomb ML, Handke P, Mills T, Ramey CJ, Hoang T, Gill RT. Warnecke TE, et al. Among authors: gill rt. Metab Eng. 2010 May;12(3):241-50. doi: 10.1016/j.ymben.2009.12.002. Epub 2010 Jan 6. Metab Eng. 2010. PMID: 20060059

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