Salzberg SL - Search Results

1

Kingsford C, Salzberg SL. Kingsford C, et al. Among authors: salzberg sl. Nat Biotechnol. 2008 Sep;26(9):1011-3. doi: 10.1038/nbt0908-1011. Nat Biotechnol. 2008. PMID: 18779814 Free PMC article. Review.

2

Finding genes in DNA using decision trees and dynamic programming.

Salzberg S, Chen X, Henderson J, Fasman K. Salzberg S, et al. Proc Int Conf Intell Syst Mol Biol. 1996;4:201-10. Proc Int Conf Intell Syst Mol Biol. 1996. PMID: 8877520

3

Genome analysis linking recent European and African influenza (H5N1) viruses.

Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly MM, Brown IH, Couacy-Hymann E, De Mia GM, Dung do H, Guercio A, Joannis T, Maken Ali AS, Osmani A, Padalino I, Saad MD, Savić V, Sengamalay NA, Yingst S, Zaborsky J, Zorman-Rojs O, Ghedin E, Capua I. Salzberg SL, et al. Emerg Infect Dis. 2007 May;13(5):713-8. doi: 10.3201/eid1305.070013. Emerg Infect Dis. 2007. PMID: 17553249 Free PMC article.

4

A unified model explaining the offsets of overlapping and near-overlapping prokaryotic genes.

Kingsford C, Delcher AL, Salzberg SL. Kingsford C, et al. Among authors: salzberg sl. Mol Biol Evol. 2007 Sep;24(9):2091-8. doi: 10.1093/molbev/msm145. Epub 2007 Jul 21. Mol Biol Evol. 2007. PMID: 17642473 Free PMC article.

5

The contents of the syringe.

Salzberg S. Salzberg S. Nature. 2008 Jul 10;454(7201):160-1. doi: 10.1038/454160a. Nature. 2008. PMID: 18615063 Free PMC article. No abstract available.

6

How to map billions of short reads onto genomes.

Trapnell C, Salzberg SL. Trapnell C, et al. Among authors: salzberg sl. Nat Biotechnol. 2009 May;27(5):455-7. doi: 10.1038/nbt0509-455. Nat Biotechnol. 2009. PMID: 19430453 Free PMC article.

7

2009 Swine-origin influenza A (H1N1) resembles previous influenza isolates.

Kingsford C, Nagarajan N, Salzberg SL. Kingsford C, et al. Among authors: salzberg sl. PLoS One. 2009 Jul 28;4(7):e6402. doi: 10.1371/journal.pone.0006402. PLoS One. 2009. PMID: 19636415 Free PMC article.

8

Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models.

Brady A, Salzberg SL. Brady A, et al. Among authors: salzberg sl. Nat Methods. 2009 Sep;6(9):673-6. doi: 10.1038/nmeth.1358. Epub 2009 Aug 2. Nat Methods. 2009. PMID: 19648916 Free PMC article.

9

Mind the gaps.

Salzberg SL. Salzberg SL. Nat Methods. 2010 Feb;7(2):105-6. doi: 10.1038/nmeth0210-105. Nat Methods. 2010. PMID: 20111034 Free PMC article.

10

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L. Trapnell C, et al. Among authors: salzberg sl. Nat Biotechnol. 2010 May;28(5):511-5. doi: 10.1038/nbt.1621. Epub 2010 May 2. Nat Biotechnol. 2010. PMID: 20436464 Free PMC article.

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