Emili A - Search Results

1

Computational and experimental approaches to chart the Escherichia coli cell-envelope-associated proteome and interactome.

Díaz-Mejía JJ, Babu M, Emili A. Díaz-Mejía JJ, et al. Among authors: emili a. FEMS Microbiol Rev. 2009 Jan;33(1):66-97. doi: 10.1111/j.1574-6976.2008.00141.x. Epub 2008 Nov 27. FEMS Microbiol Rev. 2009. PMID: 19054114 Free PMC article. Review.

2

Interaction network containing conserved and essential protein complexes in Escherichia coli.

Butland G, Peregrín-Alvarez JM, Li J, Yang W, Yang X, Canadien V, Starostine A, Richards D, Beattie B, Krogan N, Davey M, Parkinson J, Greenblatt J, Emili A. Butland G, et al. Among authors: emili a. Nature. 2005 Feb 3;433(7025):531-7. doi: 10.1038/nature03239. Nature. 2005. PMID: 15690043

3

A skeleton of the human protein interactome.

Ghavidel A, Cagney G, Emili A. Ghavidel A, et al. Among authors: emili a. Cell. 2005 Sep 23;122(6):830-2. doi: 10.1016/j.cell.2005.09.006. Cell. 2005. PMID: 16179252 Free article. Review.

4

Computational prediction of cancer-gene function.

Hu P, Bader G, Wigle DA, Emili A. Hu P, et al. Among authors: emili a. Nat Rev Cancer. 2007 Jan;7(1):23-34. doi: 10.1038/nrc2036. Epub 2006 Dec 14. Nat Rev Cancer. 2007. PMID: 17167517 Review.

5

Experimental and computational procedures for the assessment of protein complexes on a genome-wide scale.

Musso GA, Zhang Z, Emili A. Musso GA, et al. Among authors: emili a. Chem Rev. 2007 Aug;107(8):3585-600. doi: 10.1021/cr0682857. Epub 2007 Jul 14. Chem Rev. 2007. PMID: 17630806 Review. No abstract available.

6

eSGA: E. coli synthetic genetic array analysis.

Butland G, Babu M, Díaz-Mejía JJ, Bohdana F, Phanse S, Gold B, Yang W, Li J, Gagarinova AG, Pogoutse O, Mori H, Wanner BL, Lo H, Wasniewski J, Christopolous C, Ali M, Venn P, Safavi-Naini A, Sourour N, Caron S, Choi JY, Laigle L, Nazarians-Armavil A, Deshpande A, Joe S, Datsenko KA, Yamamoto N, Andrews BJ, Boone C, Ding H, Sheikh B, Moreno-Hagelseib G, Greenblatt JF, Emili A. Butland G, et al. Among authors: emili a. Nat Methods. 2008 Sep;5(9):789-95. doi: 10.1038/nmeth.1239. Nat Methods. 2008. PMID: 18677321

7

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins.

Hu P, Janga SC, Babu M, Díaz-Mejía JJ, Butland G, Yang W, Pogoutse O, Guo X, Phanse S, Wong P, Chandran S, Christopoulos C, Nazarians-Armavil A, Nasseri NK, Musso G, Ali M, Nazemof N, Eroukova V, Golshani A, Paccanaro A, Greenblatt JF, Moreno-Hagelsieb G, Emili A. Hu P, et al. Among authors: emili a. PLoS Biol. 2009 Apr 28;7(4):e96. doi: 10.1371/journal.pbio.1000096. PLoS Biol. 2009. PMID: 19402753 Free PMC article.

8

Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry.

Babu M, Krogan NJ, Awrey DE, Emili A, Greenblatt JF. Babu M, et al. Among authors: emili a. Methods Mol Biol. 2009;548:187-207. doi: 10.1007/978-1-59745-540-4_11. Methods Mol Biol. 2009. PMID: 19521826

9

Sequential peptide affinity purification system for the systematic isolation and identification of protein complexes from Escherichia coli.

Babu M, Butland G, Pogoutse O, Li J, Greenblatt JF, Emili A. Babu M, et al. Among authors: emili a. Methods Mol Biol. 2009;564:373-400. doi: 10.1007/978-1-60761-157-8_22. Methods Mol Biol. 2009. PMID: 19544035

10

Systems-level approaches for identifying and analyzing genetic interaction networks in Escherichia coli and extensions to other prokaryotes.

Babu M, Musso G, Díaz-Mejía JJ, Butland G, Greenblatt JF, Emili A. Babu M, et al. Among authors: emili a. Mol Biosyst. 2009 Dec;5(12):1439-55. doi: 10.1039/B907407d. Epub 2009 Jul 31. Mol Biosyst. 2009. PMID: 19763343 Review.

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