Kurokawa K - Search Results

1

Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis.

Uyar E, Kurokawa K, Yoshimura M, Ishikawa S, Ogasawara N, Oshima T. Uyar E, et al. Among authors: kurokawa k. J Bacteriol. 2009 Apr;191(7):2388-91. doi: 10.1128/JB.01594-08. Epub 2009 Jan 16. J Bacteriol. 2009. PMID: 19151137 Free PMC article.

2

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, Yokoyama K, Han CG, Ohtsubo E, Nakayama K, Murata T, Tanaka M, Tobe T, Iida T, Takami H, Honda T, Sasakawa C, Ogasawara N, Yasunaga T, Kuhara S, Shiba T, Hattori M, Shinagawa H. Hayashi T, et al. Among authors: kurokawa k. DNA Res. 2001 Feb 28;8(1):11-22. doi: 10.1093/dnares/8.1.11. DNA Res. 2001. PMID: 11258796 Free article.

3

Cell lysis directed by sigmaE in early stationary phase and effect of induction of the rpoE gene on global gene expression in Escherichia coli.

Kabir MS, Yamashita D, Koyama S, Oshima T, Kurokawa K, Maeda M, Tsunedomi R, Murata M, Wada C, Mori H, Yamada M. Kabir MS, et al. Among authors: kurokawa k. Microbiology (Reading). 2005 Aug;151(Pt 8):2721-2735. doi: 10.1099/mic.0.28004-0. Microbiology (Reading). 2005. PMID: 16079349 Free article.

4

Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase.

Oshima T, Ishikawa S, Kurokawa K, Aiba H, Ogasawara N. Oshima T, et al. Among authors: kurokawa k. DNA Res. 2006 Aug 31;13(4):141-53. doi: 10.1093/dnares/dsl009. Epub 2006 Oct 17. DNA Res. 2006. PMID: 17046956 Free article.

5

The entire organization of transcription units on the Bacillus subtilis genome.

Kobayashi H, Akitomi J, Fujii N, Kobayashi K, Altaf-Ul-Amin M, Kurokawa K, Ogasawara N, Kanaya S. Kobayashi H, et al. Among authors: kurokawa k. BMC Genomics. 2007 Jun 28;8:197. doi: 10.1186/1471-2164-8-197. BMC Genomics. 2007. PMID: 17598888 Free PMC article.

6

Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method.

Ishikawa S, Ogura Y, Yoshimura M, Okumura H, Cho E, Kawai Y, Kurokawa K, Oshima T, Ogasawara N. Ishikawa S, et al. Among authors: kurokawa k. DNA Res. 2007 Aug 31;14(4):155-68. doi: 10.1093/dnares/dsm017. Epub 2007 Oct 10. DNA Res. 2007. PMID: 17932079 Free PMC article.

7

Metabolomics approach for determining growth-specific metabolites based on Fourier transform ion cyclotron resonance mass spectrometry.

Takahashi H, Kai K, Shinbo Y, Tanaka K, Ohta D, Oshima T, Altaf-Ul-Amin M, Kurokawa K, Ogasawara N, Kanaya S. Takahashi H, et al. Among authors: kurokawa k. Anal Bioanal Chem. 2008 Aug;391(8):2769-82. doi: 10.1007/s00216-008-2195-5. Epub 2008 Jun 16. Anal Bioanal Chem. 2008. PMID: 18560811 Free PMC article.

8

Systematic identification and sequence analysis of the genomic islands of the enteropathogenic Escherichia coli strain B171-8 by the combined use of whole-genome PCR scanning and fosmid mapping.

Ogura Y, Abe H, Katsura K, Kurokawa K, Asadulghani M, Iguchi A, Ooka T, Nakayama K, Yamashita A, Hattori M, Tobe T, Hayashi T. Ogura Y, et al. Among authors: kurokawa k. J Bacteriol. 2008 Nov;190(21):6948-60. doi: 10.1128/JB.00625-08. Epub 2008 Aug 29. J Bacteriol. 2008. PMID: 18757547 Free PMC article.

9

Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69.

Iguchi A, Thomson NR, Ogura Y, Saunders D, Ooka T, Henderson IR, Harris D, Asadulghani M, Kurokawa K, Dean P, Kenny B, Quail MA, Thurston S, Dougan G, Hayashi T, Parkhill J, Frankel G. Iguchi A, et al. Among authors: kurokawa k. J Bacteriol. 2009 Jan;191(1):347-54. doi: 10.1128/JB.01238-08. Epub 2008 Oct 24. J Bacteriol. 2009. PMID: 18952797 Free PMC article.

10

Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2.

Toh H, Oshima K, Toyoda A, Ogura Y, Ooka T, Sasamoto H, Park SH, Iyoda S, Kurokawa K, Morita H, Itoh K, Taylor TD, Hayashi T, Hattori M. Toh H, et al. Among authors: kurokawa k. J Bacteriol. 2010 Feb;192(4):1165-6. doi: 10.1128/JB.01543-09. Epub 2009 Dec 11. J Bacteriol. 2010. PMID: 20008064 Free PMC article.

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