Shin D - Search Results

1

Identifying promoter features of co-regulated genes with similar network motifs.

Harari O, del Val C, Romero-Zaliz R, Shin D, Huang H, Groisman EA, Zwir I. Harari O, et al. Among authors: shin d. BMC Bioinformatics. 2009 Apr 29;10 Suppl 4(Suppl 4):S1. doi: 10.1186/1471-2105-10-S4-S1. BMC Bioinformatics. 2009. PMID: 19426448 Free PMC article.

2

Dissecting the PhoP regulatory network of Escherichia coli and Salmonella enterica.

Zwir I, Shin D, Kato A, Nishino K, Latifi T, Solomon F, Hare JM, Huang H, Groisman EA. Zwir I, et al. Among authors: shin d. Proc Natl Acad Sci U S A. 2005 Feb 22;102(8):2862-7. doi: 10.1073/pnas.0408238102. Epub 2005 Feb 9. Proc Natl Acad Sci U S A. 2005. PMID: 15703297 Free PMC article.

3

Bacterial nucleoid-associated protein uncouples transcription levels from transcription timing.

Zwir I, Yeo WS, Shin D, Latifi T, Huang H, Groisman EA. Zwir I, et al. Among authors: shin d. mBio. 2014 Oct 7;5(5):e01485-14. doi: 10.1128/mBio.01485-14. mBio. 2014. PMID: 25293763 Free PMC article.

4

Signal-dependent binding of the response regulators PhoP and PmrA to their target promoters in vivo.

Shin D, Groisman EA. Shin D, et al. J Biol Chem. 2005 Feb 11;280(6):4089-94. doi: 10.1074/jbc.M412741200. Epub 2004 Nov 29. J Biol Chem. 2005. PMID: 15569664 Free article.

5

A positive feedback loop promotes transcription surge that jump-starts Salmonella virulence circuit.

Shin D, Lee EJ, Huang H, Groisman EA. Shin D, et al. Science. 2006 Dec 8;314(5805):1607-9. doi: 10.1126/science.1134930. Science. 2006. PMID: 17158330

6

Intrinsic negative feedback governs activation surge in two-component regulatory systems.

Yeo WS, Zwir I, Huang HV, Shin D, Kato A, Groisman EA. Yeo WS, et al. Among authors: shin d. Mol Cell. 2012 Feb 10;45(3):409-21. doi: 10.1016/j.molcel.2011.12.027. Mol Cell. 2012. PMID: 22325356 Free PMC article.

7

Activated by different signals, the PhoP/PhoQ two-component system differentially regulates metal uptake.

Choi E, Groisman EA, Shin D. Choi E, et al. Among authors: shin d. J Bacteriol. 2009 Dec;191(23):7174-81. doi: 10.1128/JB.00958-09. Epub 2009 Oct 2. J Bacteriol. 2009. PMID: 19801407 Free PMC article.

8

RstA-promoted expression of the ferrous iron transporter FeoB under iron-replete conditions enhances Fur activity in Salmonella enterica.

Jeon J, Kim H, Yun J, Ryu S, Groisman EA, Shin D. Jeon J, et al. Among authors: shin d. J Bacteriol. 2008 Nov;190(22):7326-34. doi: 10.1128/JB.00903-08. Epub 2008 Sep 12. J Bacteriol. 2008. PMID: 18790861 Free PMC article.

9

Evolution of a bacterial regulon controlling virulence and Mg(2+) homeostasis.

Perez JC, Shin D, Zwir I, Latifi T, Hadley TJ, Groisman EA. Perez JC, et al. Among authors: shin d. PLoS Genet. 2009 Mar;5(3):e1000428. doi: 10.1371/journal.pgen.1000428. Epub 2009 Mar 20. PLoS Genet. 2009. PMID: 19300486 Free PMC article.

10

Expression of STM4467-encoded arginine deiminase controlled by the STM4463 regulator contributes to Salmonella enterica serovar Typhimurium virulence.

Choi Y, Choi J, Groisman EA, Kang DH, Shin D, Ryu S. Choi Y, et al. Among authors: shin d. Infect Immun. 2012 Dec;80(12):4291-7. doi: 10.1128/IAI.00880-12. Epub 2012 Sep 24. Infect Immun. 2012. PMID: 23006851 Free PMC article.

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