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Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo.
Tsibris AM, Korber B, Arnaout R, Russ C, Lo CC, Leitner T, Gaschen B, Theiler J, Paredes R, Su Z, Hughes MD, Gulick RM, Greaves W, Coakley E, Flexner C, Nusbaum C, Kuritzkes DR. Tsibris AM, et al. Among authors: leitner t. PLoS One. 2009 May 25;4(5):e5683. doi: 10.1371/journal.pone.0005683. PLoS One. 2009. PMID: 19479085 Free PMC article.
jpHMM: improving the reliability of recombination prediction in HIV-1.
Schultz AK, Zhang M, Bulla I, Leitner T, Korber B, Morgenstern B, Stanke M. Schultz AK, et al. Among authors: leitner t. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W647-51. doi: 10.1093/nar/gkp371. Epub 2009 May 14. Nucleic Acids Res. 2009. PMID: 19443440 Free PMC article.
Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing.
Fischer W, Ganusov VV, Giorgi EE, Hraber PT, Keele BF, Leitner T, Han CS, Gleasner CD, Green L, Lo CC, Nag A, Wallstrom TC, Wang S, McMichael AJ, Haynes BF, Hahn BH, Perelson AS, Borrow P, Shaw GM, Bhattacharya T, Korber BT. Fischer W, et al. Among authors: leitner t. PLoS One. 2010 Aug 20;5(8):e12303. doi: 10.1371/journal.pone.0012303. PLoS One. 2010. PMID: 20808830 Free PMC article.
Epitope-specific CD8+ T lymphocytes cross-recognize mutant simian immunodeficiency virus (SIV) sequences but fail to contain very early evolution and eventual fixation of epitope escape mutations during SIV infection.
Cale EM, Hraber P, Giorgi EE, Fischer W, Bhattacharya T, Leitner T, Yeh WW, Gleasner C, Green LD, Han CS, Korber B, Letvin NL. Cale EM, et al. Among authors: leitner t. J Virol. 2011 Apr;85(8):3746-57. doi: 10.1128/JVI.02420-10. Epub 2011 Feb 9. J Virol. 2011. PMID: 21307185 Free PMC article.
Viral linkage in HIV-1 seroconverters and their partners in an HIV-1 prevention clinical trial.
Campbell MS, Mullins JI, Hughes JP, Celum C, Wong KG, Raugi DN, Sorensen S, Stoddard JN, Zhao H, Deng W, Kahle E, Panteleeff D, Baeten JM, McCutchan FE, Albert J, Leitner T, Wald A, Corey L, Lingappa JR; Partners in Prevention HSV/HIV Transmission Study Team. Campbell MS, et al. Among authors: leitner t. PLoS One. 2011 Mar 2;6(3):e16986. doi: 10.1371/journal.pone.0016986. PLoS One. 2011. PMID: 21399681 Free PMC article. Clinical Trial.
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1.
Zhang M, Schultz AK, Calef C, Kuiken C, Leitner T, Korber B, Morgenstern B, Stanke M. Zhang M, et al. Among authors: leitner t. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W463-5. doi: 10.1093/nar/gkl255. Nucleic Acids Res. 2006. PMID: 16845050 Free PMC article.
178 results