Rouhanifard SH - Search Results

1

The PTEN-regulating microRNA miR-26a is amplified in high-grade glioma and facilitates gliomagenesis in vivo.

Huse JT, Brennan C, Hambardzumyan D, Wee B, Pena J, Rouhanifard SH, Sohn-Lee C, le Sage C, Agami R, Tuschl T, Holland EC. Huse JT, et al. Among authors: rouhanifard sh. Genes Dev. 2009 Jun 1;23(11):1327-37. doi: 10.1101/gad.1777409. Genes Dev. 2009. PMID: 19487573 Free PMC article.

2

miRNA in situ hybridization in formaldehyde and EDC-fixed tissues.

Pena JT, Sohn-Lee C, Rouhanifard SH, Ludwig J, Hafner M, Mihailovic A, Lim C, Holoch D, Berninger P, Zavolan M, Tuschl T. Pena JT, et al. Among authors: rouhanifard sh. Nat Methods. 2009 Feb;6(2):139-41. doi: 10.1038/nmeth.1294. Epub 2009 Jan 11. Nat Methods. 2009. PMID: 19137005 Free PMC article.

3

MicroRNA-21 contributes to myocardial disease by stimulating MAP kinase signalling in fibroblasts.

Thum T, Gross C, Fiedler J, Fischer T, Kissler S, Bussen M, Galuppo P, Just S, Rottbauer W, Frantz S, Castoldi M, Soutschek J, Koteliansky V, Rosenwald A, Basson MA, Licht JD, Pena JT, Rouhanifard SH, Muckenthaler MU, Tuschl T, Martin GR, Bauersachs J, Engelhardt S. Thum T, et al. Among authors: rouhanifard sh. Nature. 2008 Dec 18;456(7224):980-4. doi: 10.1038/nature07511. Epub 2008 Nov 30. Nature. 2008. PMID: 19043405

4

Visualizing adenosine-to-inosine RNA editing in single mammalian cells.

Mellis IA, Gupte R, Raj A, Rouhanifard SH. Mellis IA, et al. Among authors: rouhanifard sh. Nat Methods. 2017 Aug;14(8):801-804. doi: 10.1038/nmeth.4332. Epub 2017 Jun 12. Nat Methods. 2017. PMID: 28604724 Free PMC article.

5

ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.

Rouhanifard SH, Mellis IA, Dunagin M, Bayatpour S, Jiang CL, Dardani I, Symmons O, Emert B, Torre E, Cote A, Sullivan A, Stamatoyannopoulos JA, Raj A. Rouhanifard SH, et al. Nat Biotechnol. 2018 Nov 12:10.1038/nbt.4286. doi: 10.1038/nbt.4286. Online ahead of print. Nat Biotechnol. 2018. PMID: 30418432 Free PMC article.

6

Amendments: Author Correction: ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.

Rouhanifard SH, Mellis IA, Dunagin M, Bayatpour S, Jiang CL, Dardani I, Symmons O, Emert B, Torre E, Cote A, Sullivan A, Stamatoyannopoulos JA, Raj A. Rouhanifard SH, et al. Nat Biotechnol. 2019 Jan 3;37(1):102. doi: 10.1038/nbt0119-102b. Nat Biotechnol. 2019. PMID: 30605160 No abstract available.

7

Neutrophils and Ly6Chi monocytes collaborate in generating an optimal cytokine response that protects against pulmonary Legionella pneumophila infection.

Casson CN, Doerner JL, Copenhaver AM, Ramirez J, Holmgren AM, Boyer MA, Siddarthan IJ, Rouhanifard SH, Raj A, Shin S. Casson CN, et al. Among authors: rouhanifard sh. PLoS Pathog. 2017 Apr 6;13(4):e1006309. doi: 10.1371/journal.ppat.1006309. eCollection 2017 Apr. PLoS Pathog. 2017. PMID: 28384349 Free PMC article.

8

Click chemistry-based amplification and detection of endogenous RNA and DNA molecules in situ using clampFISH probes.

Tavakoli S, Liu Y, Potts JL, Rouhanifard SH. Tavakoli S, et al. Among authors: rouhanifard sh. Methods Enzymol. 2020;641:459-476. doi: 10.1016/bs.mie.2020.04.049. Epub 2020 Jun 15. Methods Enzymol. 2020. PMID: 32713535

9

Nanopore signal deviations from pseudouridine modifications in RNA are sequence-specific: quantification requires dedicated synthetic controls.

Makhamreh A, Tavakoli S, Fallahi A, Kang X, Gamper H, Nabizadehmashhadtoroghi M, Jain M, Hou YM, Rouhanifard SH, Wanunu M. Makhamreh A, et al. Among authors: rouhanifard sh. Sci Rep. 2024 Sep 28;14(1):22457. doi: 10.1038/s41598-024-72994-9. Sci Rep. 2024. PMID: 39341872 Free PMC article.

10

Multicellular, IVT-derived, unmodified human transcriptome for nanopore-direct RNA analysis.

McCormick CA, Akeson S, Tavakoli S, Bloch D, Klink IN, Jain M, Rouhanifard SH. McCormick CA, et al. Among authors: rouhanifard sh. GigaByte. 2024 Jun 17;2024:gigabyte129. doi: 10.46471/gigabyte.129. eCollection 2024. GigaByte. 2024. PMID: 38962390 Free PMC article.

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