Kumasaka T - Search Results

1

Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.

Kumasaka T, Aritake K, Ago H, Irikura D, Tsurumura T, Yamamoto M, Miyano M, Urade Y, Hayaishi O. Kumasaka T, et al. J Biol Chem. 2009 Aug 14;284(33):22344-22352. doi: 10.1074/jbc.M109.018341. Epub 2009 Jun 22. J Biol Chem. 2009. PMID: 19546224 Free PMC article.

2

X-ray structure of beta-carbonic anhydrase from the red alga, Porphyridium purpureum, reveals a novel catalytic site for CO(2) hydration.

Mitsuhashi S, Mizushima T, Yamashita E, Yamamoto M, Kumasaka T, Moriyama H, Ueki T, Miyachi S, Tsukihara T. Mitsuhashi S, et al. Among authors: kumasaka t. J Biol Chem. 2000 Feb 25;275(8):5521-6. doi: 10.1074/jbc.275.8.5521. J Biol Chem. 2000. PMID: 10681531 Free article.

3

Crystallization and preliminary X-ray crystallographic studies of Thermus thermophilus HB8 MutM protein involved in repairs of oxidative DNA damage.

Sugahara M, Mikawa T, Kato R, Fukuyama K, Kumasaka T, Yamamoto M, Inoue Y, Kuramitsu S. Sugahara M, et al. Among authors: kumasaka t. J Biochem. 2000 Jan;127(1):9-11. doi: 10.1093/oxfordjournals.jbchem.a022588. J Biochem. 2000. PMID: 10731660 Free article.

4

Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.

Nakai T, Hasegawa T, Yamashita E, Yamamoto M, Kumasaka T, Ueki T, Nanba H, Ikenaka Y, Takahashi S, Sato M, Tsukihara T. Nakai T, et al. Among authors: kumasaka t. Structure. 2000 Jul 15;8(7):729-37. doi: 10.1016/s0969-2126(00)00160-x. Structure. 2000. PMID: 10903946 Free article.

5

Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.

Sugahara M, Mikawa T, Kumasaka T, Yamamoto M, Kato R, Fukuyama K, Inoue Y, Kuramitsu S. Sugahara M, et al. Among authors: kumasaka t. EMBO J. 2000 Aug 1;19(15):3857-69. doi: 10.1093/emboj/19.15.3857. EMBO J. 2000. PMID: 10921868 Free PMC article.

6

The adoption of a twisted structure of importin-beta is essential for the protein-protein interaction required for nuclear transport.

Lee SJ, Imamoto N, Sakai H, Nakagawa A, Kose S, Koike M, Yamamoto M, Kumasaka T, Yoneda Y, Tsukihara T. Lee SJ, et al. Among authors: kumasaka t. J Mol Biol. 2000 Sep 8;302(1):251-64. doi: 10.1006/jmbi.2000.4055. J Mol Biol. 2000. PMID: 10964573

7

Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida.

Motoshima H, Inagaki K, Kumasaka T, Furuichi M, Inoue H, Tamura T, Esaki N, Soda K, Tanaka N, Yamamoto M, Tanaka H. Motoshima H, et al. Among authors: kumasaka t. J Biochem. 2000 Sep;128(3):349-54. doi: 10.1093/oxfordjournals.jbchem.a022760. J Biochem. 2000. PMID: 10965031 Free article.

8

Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor.

Kunishima N, Shimada Y, Tsuji Y, Sato T, Yamamoto M, Kumasaka T, Nakanishi S, Jingami H, Morikawa K. Kunishima N, et al. Among authors: kumasaka t. Nature. 2000 Oct 26;407(6807):971-7. doi: 10.1038/35039564. Nature. 2000. PMID: 11069170

9

Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.

Toyoda T, Tin OF, Ito K, Fujiwara T, Kumasaka T, Yamamoto M, Garber MB, Nakamura Y. Toyoda T, et al. Among authors: kumasaka t. RNA. 2000 Oct;6(10):1432-44. doi: 10.1017/s1355838200001060. RNA. 2000. PMID: 11073219 Free PMC article.

10

Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.

Hori T, Kumasaka T, Yamamoto M, Nonaka N, Tanaka N, Hashimoto Y, Ueki U, Takio K. Hori T, et al. Among authors: kumasaka t. Acta Crystallogr D Biol Crystallogr. 2001 Mar;57(Pt 3):361-8. doi: 10.1107/s0907444900019740. Acta Crystallogr D Biol Crystallogr. 2001. PMID: 11223512

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